# Relationship between land use type and bacterial composition in adjacent streams and riparian zones

**Authors:** Javad Sadeghi, Shayenna Nolan, Patricia Voyer, Zeena Biro, Yasmin Ismail, Emma Mineau, Gina Peters, Alyssa Frazao, Emily Browne, Lauren Weller, Catherine M. Febria, Terrence H. Bell, Daniel Heath

PMC · DOI: 10.1371/journal.pone.0339590 · PLOS One · 2026-02-09

## TL;DR

This study explores how land use affects bacterial communities in streams and riparian zones, finding that agricultural areas influence stream bacteria more than urban areas.

## Contribution

The study uniquely evaluates how soil microbiota influence aquatic ecosystems based on land use in riparian systems.

## Key findings

- Bacterial composition in soil samples near streams was similar regardless of distance from the river, but differed from water samples.
- Stream bacterial diversity was higher in agricultural areas compared to urban areas, though soil diversity was unaffected by land use.
- Stream bacteria in agricultural areas were significantly influenced by NH3 and NO3-NO2 concentrations.

## Abstract

Anthropogenic activities can negatively impact riparian and stream ecosystems, resulting in declines in biodiversity and certain ecosystem functions. Microbiomes in these environments play crucial roles in primary production, nutrient cycling, and maintaining air, soil, and water quality. While previous studies have examined the effects of land use on streams and soil microbiota, few have evaluated the effects of soil microbiota on aquatic ecosystems based on land use in the riparian systems. In this study, we characterized bacterial composition in six small to moderate-sized streams in both urban and agricultural land use areas using 16S rRNA gene amplicon sequencing and related this to measured physicochemical variables in these environments. Bacterial composition was comparable in soil samples collected at 3m and 1m from the river and in edge and sediment samples, but these differed significantly from bacterial composition in adjacent water. Bacterial alpha diversity (Shannon index) in streams was higher when adjacent to agricultural sites than urban sites, but no effect of land use type on bacterial alpha diversity was observed in soil samples. On the other hand, land use and location had significant impacts on bacterial composition in both soil and water samples. Furthermore, in our sampling sites, stream bacterial composition in agricultural sites was significantly influenced by NH3 and NO3-NO2 concentrations. These findings raise the possibility that aquatic bacterial function may be modified/influenced even when adjacent soil microbiomes appear relatively unaffected. Moreover, given the sensitivity of the water microbiota to land use variation, our results suggest that aquatic bacterial composition and diversity can serve as a powerful bioindicator for assessing riparian impacts on ecosystem health.

## Linked entities

- **Chemicals:** NH3 (PubChem CID 222)

## Full-text entities

- **Chemicals:** NH3 (MESH:D000641), NO3-NO2 (-)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12885259/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12885259/full.md

## References

62 references — full list in the complete paper: https://tomesphere.com/paper/PMC12885259/full.md

---
Source: https://tomesphere.com/paper/PMC12885259