# Exosome-related immune signatures and peripheral blood assays predict prognosis and immunotherapy response in hepatocellular carcinoma

**Authors:** Ruolian Gao, Lili Mi, Jianfei Shi, Meng Zhang, Xiaoling Duan, Man Zhao, Fei Yin

PMC · DOI: 10.3389/fcell.2025.1696790 · Frontiers in Cell and Developmental Biology · 2026-01-26

## TL;DR

This study identifies exosome-related immune genes that predict survival and immunotherapy response in liver cancer patients, with peripheral blood tests offering a non-invasive way to assess treatment outcomes.

## Contribution

A novel TDEI gene-based signature and peripheral blood assays for predicting HCC prognosis and immunotherapy response are introduced.

## Key findings

- A prognostic model combining S100A11 and PUSL1 genes effectively predicts HCC patient survival.
- S100A11 is linked to poor immunotherapy response and TME regulation via CAFs and M2 macrophages.
- Peripheral blood markers like IL-6, CD8+ T cells, and PNI predict immunotherapy response.

## Abstract

Exosomes are involved in cell-to-cell communication, and tumor-derived exosomes play an important role in the occurrence, development, and drug resistance of hepatocellular carcinoma (HCC) by regulating components in the tumor microenvironment (TME). However, the role of tumor-derived exosome-related immune (TDEI) genes in predicting HCC prognosis and immune therapy efficacy is not yet fully understood.

The exoRBase2.0, GSE181946, and The Cancer Genome Atlas (TCGA) databases were used to analyze TDEI genes. Cox regression and least absolute shrinkage and selection operator (Lasso) analyses were used to identify TDEI genes that are closely related to the overall survival (OS) of patients with HCC. Subsequently, a predictive model was constructed based on the TCGA database and validated in the International Cancer Genome Consortium (ICGC) database. A nomogram was developed to predict survival. Immune infiltration analysis was used to estimate changes in immune cells and stromal cells in the TME. Immunohistochemistry (IHC), Western blot, and qRT-PCR demonstrated the regulation of TDEI genes on the TME. Peripheral blood assays were used for predicting immunotherapy response.

A combined prognostic model integrating S100A11 and PUSL1 expression with clinical characteristics was constructed, and it effectively predicted survival in HCC patients. S100A11 was associated with poorer immunotherapy efficacy. S100A11 regulated the TME by modulating interactions between cancer-associated fibroblasts (CAFs) and M2 macrophages. Experimental evidence demonstrated that S100A11 expression was associated with CAFs, M2 macrophage infiltration, and poorer progression-free survival (PFS). Interleukin-6 (IL-6), peripheral blood CD
8+
T cells, and prognostic nutritional index (PNI) can predict the response to immunotherapy.

In this study, we identify a novel signature based on TDEI genes that has the potential to be a biomarker for predicting the prognosis and immunotherapy response for HCC. Peripheral blood tests can be used to predict the response to HCC immunotherapy. In our study, we provide an immunologic perspective for the development of precision therapy for HCC.

## Linked entities

- **Genes:** S100A11 (S100 calcium binding protein A11) [NCBI Gene 6282], PUSL1 (pseudouridine synthase like 1) [NCBI Gene 126789]
- **Diseases:** hepatocellular carcinoma (MONDO:0007256), HCC (MONDO:0007256)

## Full-text entities

- **Genes:** PUSL1 (pseudouridine synthase like 1) [NCBI Gene 126789], IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, S100A11 (S100 calcium binding protein A11) [NCBI Gene 6282] {aka HEL-S-43, MLN70, S100C}
- **Diseases:** HCC (MESH:D006528), Cancer (MESH:D009369)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12883759/full.md

## References

49 references — full list in the complete paper: https://tomesphere.com/paper/PMC12883759/full.md

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Source: https://tomesphere.com/paper/PMC12883759