# Ursodeoxycholic acid alleviates high-fat diet-induced liver injury by modulating gut microbiota-mediated bile acid metabolism: an integrated microbiota-metabolomics analysis

**Authors:** Xueyun Dong, Wen Sun, Hao Xu, Yunhan Xie, Jiayuan He, Xuehui Liu, Xinyu Liu, Asmaa Ali, Min Chen, Leilei Zhang, Liang Wu, Keke Shao

PMC · DOI: 10.3389/fnut.2026.1714100 · Frontiers in Nutrition · 2026-01-26

## TL;DR

Ursodeoxycholic acid (UDCA) protects against liver damage from high-fat diets by changing gut bacteria and bile acid metabolism, offering new insights into treating fatty liver disease.

## Contribution

This study is the first to integrate microbiota-metabolomics analysis to reveal UDCA's multifaceted mechanisms in NAFLD treatment.

## Key findings

- UDCA reduces liver injury and steatosis in mice on high-fat diets.
- UDCA alters gut microbiota, increasing beneficial bacteria and reducing inflammation.
- UDCA activates protective signaling pathways and modulates bile acid metabolism.

## Abstract

Ursodeoxycholic acid (UDCA), a naturally occurring bile acid with established hepatoprotective properties, has garnered attention for its potential role in metabolic health. This study provides scientific validation for these traditional uses by demonstrating UDCA’s protective mechanisms against non-alcoholic fatty liver disease (NAFLD) through gut microbiota modulation and metabolic regulation. This study elucidates the therapeutic mechanisms of UDCA against high-fat diet-induced NAFLD through integrated microbiota-metabolomics analysis.

Using a 12-week murine NAFLD model, oral UDCA (15 mg/kg/day and 30 mg/kg/day) was administered to evaluate its hepatoprotective effects. Hepatic steatosis and injury were assessed via serum ALT/AST levels, lipid profiles, and histopathology. Ultra-performance liquid chromatography–tandem mass spectrometry (UPLC-MS/MS) quantified bile acid metabolites, while 16S rRNA sequencing analyzed gut microbiota composition. Serum metabolomics and network pharmacology were employed to identify metabolic pathways and mechanistic targets, respectively. Molecular analyses (qPCR/Western blot) assessed PPARγ/Nrf2/NF-κB signaling.

UDCA treatment significantly ameliorated high-fat diet-induced NAFLD, as demonstrated by improved serum ALT/AST levels, attenuated hepatic steatosis, and reduced histopathological damage. UPLC-MS/MS analysis revealed a marked reorganization of bile acid metabolism, characterized by elevated non-12α-hydroxylated bile acids (UDCA, TUDCA) and enhanced alternative synthesis via CYP27A1 upregulation. 16S rRNA sequencing identified UDCA-driven restructuring of the gut microbiota, with specific enrichment of short-chain fatty acid-producing Muribaculum spp. and suppression of pro-inflammatory Prevotella (CAG-485). Serum metabolomics further confirmed these benefits, showing increased eicosapentaenoic acid (anti-inflammatory) and decreased long-chain acylcarnitines (lipid peroxidation markers). At the molecular level, UDCA activated PPARγ/Nrf2 antioxidative signaling while inhibiting NF-κB-mediated inflammation, and network pharmacology analysis identified 225 potential targets (including TNF-α, IL6, and NF-κB) within lipid/atherosclerosis pathways, collectively underscoring UDCA’s multimodal protective mechanisms against NAFLD.

These findings validate UDCA’s multifaceted hepatoprotection via microbiota-bile acid crosstalk and metabolic-inflammatory modulation. The study provides a mechanistic basis for UDCA’s traditional use in hepatobiliary disorders by integrating microbial, metabolic, and molecular evidence.

## Linked entities

- **Genes:** CYP27A1 (cytochrome P450 family 27 subfamily A member 1) [NCBI Gene 1593], PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468], GABPA (GA binding protein transcription factor subunit alpha) [NCBI Gene 2551], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790], TNF (tumor necrosis factor) [NCBI Gene 7124], IL6 (interleukin 6) [NCBI Gene 3569]
- **Chemicals:** Ursodeoxycholic acid (PubChem CID 31401), TUDCA (PubChem CID 9848818), eicosapentaenoic acid (PubChem CID 5282847)
- **Diseases:** non-alcoholic fatty liver disease (MONDO:0013209), NAFLD (MONDO:0013209)

## Full-text entities

- **Genes:** Pparg (peroxisome proliferator activated receptor gamma) [NCBI Gene 19016] {aka Nr1c3, PPAR-gamma, PPAR-gamma2, PPARgamma, PPARgamma2}, Tnf (tumor necrosis factor) [NCBI Gene 21926] {aka DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa}, Slc17a5 (solute carrier family 17 (anion/sugar transporter), member 5) [NCBI Gene 235504] {aka 4631416G20Rik, 4732491M05, AST, ISSD, NSD, SD}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Nfe2l2 (nuclear factor, erythroid derived 2, like 2) [NCBI Gene 18024] {aka Nrf2}, Cyp27a1 (cytochrome P450, family 27, subfamily a, polypeptide 1) [NCBI Gene 104086] {aka 1300013A03Rik, Cyp27}, Gpt (glutamic pyruvic transaminase, soluble) [NCBI Gene 76282] {aka 1300007J06Rik, 2310022B03Rik, ALT, ALT1, Gpt-1, Gpt1}
- **Diseases:** inflammation (MESH:D007249), Hepatic steatosis and injury (MESH:D005234), atherosclerosis (MESH:D050197), NAFLD (MESH:D065626), hepatobiliary disorders (MESH:D004066), liver injury (MESH:D017093)
- **Chemicals:** bile acid (MESH:D001647), short-chain fatty acid (MESH:D005232), TUDCA (MESH:C031655), UDCA (MESH:D014580), eicosapentaenoic acid (MESH:D015118), CAG-485 (-), lipid (MESH:D008055)
- **Species:** Muribaculum (genus) [taxon 1918540], Mus musculus (house mouse, species) [taxon 10090], Prevotella (genus) [taxon 838]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12883397/full.md

## References

73 references — full list in the complete paper: https://tomesphere.com/paper/PMC12883397/full.md

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Source: https://tomesphere.com/paper/PMC12883397