# Nutritional and Microbial Responses of Pocillopora verrucosa to Co‐Culture With Chromis viridis Damselfish

**Authors:** Rachel C. Neil, Jonathan A. Barton, Andrew Heyward, David S. Francis, Leo Nankervis, Thomas S. Mock, Craig Humphrey, David G. Bourne

PMC · DOI: 10.1111/1758-2229.70291 · Environmental Microbiology Reports · 2026-02-06

## TL;DR

Culturing corals with damselfish and live feeds improves their nutrition and restores a natural microbial community.

## Contribution

Fish co-culture and live feeds enhance coral microbiome similarity to wild corals and improve nutritional status.

## Key findings

- Co-culturing corals with damselfish and live feeds increases protein and lipid content.
- Captive corals showed reduced storage lipids compared to wild corals.
- Endozoicomonas-affiliated bacteria were only maintained in corals co-cultured with fish and live feeds.

## Abstract

Associations with fish can benefit corals by increasing growth and stress tolerance. To investigate microbial and nutritional responses of corals to fish associations in the context of enhancing coral aquaculture outcomes, 
Pocillopora verrucosa
 were cultured for 3 months with different combinations of live feeds and schools of juvenile 
Chromis viridis
 damselfish. The combined live feeds and fish treatment resulted in a bacterial community most similar to wild 
P. verrucosa, dominated by Endozoicomonas‐affiliated taxa. Protein content was enhanced in corals with access to live feeds and/or dissolved fish wastes compared to unfed controls. Total lipid concentrations were elevated in captive corals with access to dissolved fish wastes and at moderate levels in those supplied live feeds, likely due to the activity of corals' symbionts and deposition of derived lipids from live feeds, respectively. However, all captive corals demonstrated a significant reduction in storage lipid concentration compared to samples from the wild. Fatty acid analysis indicated these shifts were likely the result of higher light levels in the field supporting Symbiodiniaceae photosynthesis and potentially feeding on wild zooplankton. Co‐culturing captive corals with fish and providing appropriate live feeds may therefore offer an effective approach to improve coral nutrition, health and microbiome stability.

Assessing the microbiome of captive 
Pocillopora verrucosa
 corals showed that populations of proposed microbial symbiont Endozoicomonas could only be maintained when corals were co‐cultured with 
Chromis viridis
 damselfish and supplied live feeds. Therefore, utilising fish co‐culture in coral aquaculture may be useful to support coral microbial populations.

## Linked entities

- **Species:** Pocillopora verrucosa (taxon 203993), Chromis viridis (taxon 80977)

## Full-text entities

- **Diseases:** calcification (MESH:D002114)
- **Chemicals:** acetone (MESH:D000096), Sterol (MESH:D013261), EDTA (MESH:D004492), DMSO (MESH:D004121), PUFA (MESH:D005231), dichloromethane (MESH:D008752), DAG (MESH:D004075), carbon (MESH:D002244), 20:3n-6 (MESH:D015126), PC (MESH:D010713), phosphatidylserine (MESH:D010718), helium (MESH:D006371), carbohydrate (MESH:D002241), oxygen (MESH:D010100), aluminium (MESH:D000535), DHA (MESH:C027493), phospholipid (MESH:D010743), Water (MESH:D014867), TAG (MESH:D014280), palmitic acid (MESH:D019308), ARA (MESH:D016718), nitrogen (MESH:D009584), LPC (MESH:D008244), Lipid (MESH:D008055), FA (MESH:D005227), PE (MESH:C483858), salt (MESH:D012492), phosphatidylinositol (MESH:D010716), amino acid (MESH:D000596), methanol (MESH:D000432), ammonium (MESH:D064751), 18:4n-3 (MESH:C062895), 22:6n-3 (-), MUFA (MESH:D005229), phosphorous (MESH:D010758), 1, 2 DAG (MESH:C011439), FFA (MESH:D005230), n-3 PUFA (MESH:D015525)
- **Species:** PX clade (clade) [taxon 569578], Rotifera (rotifers, phylum) [taxon 10190], Dunaliella sp. (species) [taxon 109970], Pocillopora verrucosa (species) [taxon 203993], Chaetoceros muelleri (species) [taxon 265525], Endozoicomonas (genus) [taxon 305899], Artemia (brine shrimps, genus) [taxon 6660], Madrepora oculata (zigzag coral, species) [taxon 213639], Paracoccaceae (family) [taxon 31989], Tisochrysis lutea (species) [taxon 1321669], Proteomonas sulcata (species) [taxon 77928], Chromis viridis (blue green damselfish, species) [taxon 80977], Eguchipsammia fistula (species) [taxon 1262131], Actinopterygii (fishes, superclass) [taxon 7898], Acropora millepora (species) [taxon 45264]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12881704/full.md

## References

130 references — full list in the complete paper: https://tomesphere.com/paper/PMC12881704/full.md

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Source: https://tomesphere.com/paper/PMC12881704