# Extracellular vesicle-derived miR-760 as a novel promising candidate biomarker differentiating stable RRMS from SPMS

**Authors:** Karina Wasilewska, Angela Dziedzic, Shamundeeswari Anandan, Elżbieta Miller, Łukasz Łaczmański, Radosław Zajdel, Sylwia Michlewska, Dorota Kujawa, Marta Gancarek, Justyna Raczkowska, Lidia Włodarczyk, Patrycja Nowak, Joanna Saluk

PMC · DOI: 10.1038/s41598-026-35189-y · Scientific Reports · 2026-01-14

## TL;DR

The study identifies miR-760 as a potential biomarker to distinguish stable RRMS from SPMS, offering a non-invasive tool for multiple sclerosis diagnosis.

## Contribution

EV-derived miR-760 is proposed as a novel biomarker for differentiating MS subtypes.

## Key findings

- miR-760 showed the strongest ability to distinguish stable RRMS from SPMS.
- An integrative model combining miR-760 and FGF basic protein achieved high accuracy (AUC = 0.942).
- miR-98-5p was up-regulated in both MS subtypes compared to healthy controls.

## Abstract

Multiple sclerosis (MS) is a chronic autoimmune disease of the central nervous system with heterogenous clinical course, lacking non-invasive biomarkers for phenotype differentiation. This study aimed to explore circulating extracellular vesicle (EV)-derived microRNA (miRNA) signatures and related molecular profiles capable of distinguishing stable relapsing-remitting MS (RRMS) from secondary progressive MS (SPMS). Plasma samples were collected from stable RRMS (n = 30), SPMS (n = 30), and healthy controls (HC) (n = 30), followed by total EVs isolation and characterization using transmission electron microscopy, dynamic light scattering, and flow cytometry. RNA was extracted from EVs, and miRNA profiles were analyzed via RNA sequencing and RT-qPCR. Cytokines and neuronal/astroglial injury biomarkers were quantified using the BioPlex system and ELISA. Functional enrichment and network analyses of miRNA targets were performed, alongside logistic regression modeling to explore potential distinguishing features. Four EV-derived miRNAs (miR-760, miR-98-5p, miR-301a-3p, miR-223-3p) showed significant differences (p < 0.05) between stable RRMS and SPMS. An integrative model combining miRNAs with fibroblast growth factor (FGF) basic protein enabled accurate phenotypic differentiation (AUC = 0.942). miR-760 showed the strongest distinctive capacity for stable RRMS. Additionally, miR-98-5p was markedly up-regulated in both stable RRMS and SPMS compared to HC. Network analysis of miRNA targets suggested distinct immunoregulatory patterns across MS phenotypes. Plasma EV-derived miRNAs—particularly miR-760, and miR-98-5p—showed potential as molecular indicators associated with disease phenotype in MS. Integrating EV-miRNA profiling with protein markers support efforts toward more precise stratification of MS patients. Further studies in independent cohorts and functional validation are warranted before clinical translation.

The online version contains supplementary material available at 10.1038/s41598-026-35189-y.

## Linked entities

- **Diseases:** multiple sclerosis (MONDO:0005301), secondary progressive MS (MONDO:0000450)

## Full-text entities

- **Genes:** CSF3 (colony stimulating factor 3) [NCBI Gene 1440] {aka C17orf33, CSF3OS, GCSF}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CD63 (CD63 molecule) [NCBI Gene 967] {aka AD1, HOP-26, ME491, MLA1, OMA81H, Pltgp40}, ITGB3 (integrin subunit beta 3) [NCBI Gene 3690] {aka BDPLT16, BDPLT2, BDPLT24, CD61, FMAIT1, GP3A}, CSF2 (colony stimulating factor 2) [NCBI Gene 1437] {aka CSF, GMCSF}, MIR1915 (microRNA 1915) [NCBI Gene 100302129] {aka MIRN1915, hsa-mir-1915}, S1PR5 (sphingosine-1-phosphate receptor 5) [NCBI Gene 53637] {aka EDG8, Edg-8, S1P5, SPPR-1, SPPR-2}, CHI3L1 (chitinase 3 like 1) [NCBI Gene 1116] {aka ASRT7, CGP-39, GP-39, GP39, HC-gp39, HCGP-3P}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, IL5 (interleukin 5) [NCBI Gene 3567] {aka EDF, IL-5, TRF}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, CCR5 (C-C motif chemokine receptor 5) [NCBI Gene 1234] {aka CC-CKR-5, CCCKR5, CCR-5, CD195, CKR-5, CKR5}, AQP4 (aquaporin 4) [NCBI Gene 361] {aka MIWC, MLC4, WCH4, hAQP4}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, IL18 (interleukin 18) [NCBI Gene 3606] {aka IGIF, IL-18, IL-1g, IL1F4}, WNT3 (Wnt family member 3) [NCBI Gene 7473] {aka INT4, TETAMS}, JAG1 (jagged canonical Notch ligand 1) [NCBI Gene 182] {aka AGS, AGS1, AHD, AWS, CD339, CMT2HH}, PRKAA1 (protein kinase AMP-activated catalytic subunit alpha 1) [NCBI Gene 5562] {aka AMPK, AMPK alpha 1, AMPKa1}, CCL11 (C-C motif chemokine ligand 11) [NCBI Gene 6356] {aka SCYA11}, IL2 (interleukin 2) [NCBI Gene 3558] {aka IL-2, TCGF, lymphokine}, NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}, MOG (myelin oligodendrocyte glycoprotein) [NCBI Gene 4340] {aka BTN6, BTNL11, MOGIG2, NRCLP7}, CD46 (CD46 molecule) [NCBI Gene 4179] {aka AHUS2, MCP, MIC10, TLX, TRA2.10}, SDC1 (syndecan 1) [NCBI Gene 6382] {aka CD138, SDC, SYND1, syndecan}, CDK6 (cyclin dependent kinase 6) [NCBI Gene 1021] {aka MCPH12, PLSTIRE}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, GFAP (glial fibrillary acidic protein) [NCBI Gene 2670] {aka ALXDRD}, FAS (Fas cell surface death receptor) [NCBI Gene 355] {aka ALPS1A, APO-1, APT1, CD95, FAS1, FASTM}, CISH (cytokine inducible SH2 containing protein) [NCBI Gene 1154] {aka BACTS2, CIS, CIS-1, G18, SOCS}, IL7 (interleukin 7) [NCBI Gene 3574] {aka IL-7, IMD130}, CCL4 (C-C motif chemokine ligand 4) [NCBI Gene 6351] {aka ACT2, AT744.1, G-26, HC21, LAG-1, LAG1}, IL9 (interleukin 9) [NCBI Gene 3578] {aka HP40, IL-9, P40}, MIR146A (microRNA 146a) [NCBI Gene 406938] {aka MIRN146, MIRN146A, miR-146a, miRNA146A}, IL15 (interleukin 15) [NCBI Gene 3600] {aka IL-15}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, S1PR1 (sphingosine-1-phosphate receptor 1) [NCBI Gene 1901] {aka CD363, CHEDG1, D1S3362, ECGF1, EDG-1, EDG1}, IL1RN (interleukin 1 receptor antagonist) [NCBI Gene 3557] {aka CRMO2, DIRA, ICIL-1RA, IL-1RN, IL-1ra, IL-1ra3}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, BDNF (brain derived neurotrophic factor) [NCBI Gene 627] {aka ANON2, BULN2}, MIR223 (microRNA 223) [NCBI Gene 407008] {aka MIRN223, miRNA223, mir-223}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, CD83 (CD83 molecule) [NCBI Gene 9308] {aka BL11, HB15}, IL12B (interleukin 12B) [NCBI Gene 3593] {aka CLMF, CLMF2, IL-12B, IMD28, IMD29, NKSF}, NEFL (neurofilament light chain) [NCBI Gene 4747] {aka CMT1F, CMT2E, CMTDIG, NF-L, NF68, NFL}, MIR181C (microRNA 181c) [NCBI Gene 406957] {aka MIRN181C, mir-181c}, MIR326 (microRNA 326) [NCBI Gene 442900] {aka MIRN326, hsa-mir-326, mir-326}, P4HB (prolyl 4-hydroxylase subunit beta) [NCBI Gene 5034] {aka CLCRP1, DSI, ERBA2L, GIT, P4Hbeta, PDI}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, CHIT1 (chitinase 1) [NCBI Gene 1118] {aka CHI3, CHIT, CHITD}, MIR301A (microRNA 301a) [NCBI Gene 407027] {aka MIR301, MIRN301, MIRN301A, mir-301a}, TOMM40L (translocase of outer mitochondrial membrane 40 like) [NCBI Gene 84134] {aka TOMM40B}, MIR451A (microRNA 451a) [NCBI Gene 574411] {aka MIR451, MIRN451, hsa-mir-451, hsa-mir-451a, mir-451a}, PYGO2 (pygopus family PHD finger 2) [NCBI Gene 90780] {aka 1190004M21Rik}, TPM3 (tropomyosin 3) [NCBI Gene 7170] {aka CAPM1, CFTD, CMYO4A, CMYO4B, CMYP4A, CMYP4B}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, CXCR6 (C-X-C motif chemokine receptor 6) [NCBI Gene 10663] {aka BONZO, CD186, CDw186, STRL33, TYMSTR}, CSF1 (colony stimulating factor 1) [NCBI Gene 1435] {aka CSF-1, MCSF, PG-M-CSF}
- **Diseases:** autoimmune demyelination (MESH:D020278), neuronal (MESH:D009410), white matter lesion (MESH:D056784), spinocerebellar ataxia (MESH:D020754), PPMS (MESH:D020528), EAE (MESH:D004681), myelin damage (MESH:D020279), SLE (MESH:D008180), tissue damage (MESH:D017695), infections (MESH:D007239), NMOSD (MESH:D009471), autoimmune disease (MESH:D001327), neurodegeneration (MESH:D019636), neurological or psychiatric disorders (MESH:D001523), neuroinflammation (MESH:D000090862), MOGAD (MESH:D003711), myocardial infarction (MESH:D009203), immune-mediated disorder (MESH:C567355), MS (MESH:D009103), ischemic brain injury (MESH:D001930), chronic inflammation (MESH:D007249), HC (MESH:D000067329), ALS (MESH:D000690), EV (MESH:C535509), neurological decline (MESH:D009461), Alzheimer's (MESH:D000544), diabetes mellitus (MESH:D003920), RRMS (MESH:D020529), syndrome (MESH:D013577), injury (MESH:D014947)
- **Chemicals:** CPDA (-), sphingolipid (MESH:D013107), biotin (MESH:D001710), methylprednisolone (MESH:D008775), lipid (MESH:D008055), glutaraldehyde (MESH:D005976), glatiramer acetate (MESH:D000068717), phenol (MESH:D019800), TE (MESH:D013691), chloroform (MESH:D002725), carbon (MESH:D002244), ethanol (MESH:D000431), acid (MESH:D000143), natalizumab (MESH:D000069442), copper (MESH:D003300), uranyl acetate (MESH:C005460)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12881579/full.md

## References

90 references — full list in the complete paper: https://tomesphere.com/paper/PMC12881579/full.md

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Source: https://tomesphere.com/paper/PMC12881579