# The effect of combining HIV latency reversal with inhibition of phosphoinositide-3 kinases or B-cell lymphoma-2 on the HIV reservoir

**Authors:** Youry Kim, Jenny L. Anderson, Carolin Tumpach, Ajantha Solomon, Jesslyn Ong, Kiho Tanaka, Jennifer M. Zerbato, Tania Tan, Charis E. Teh, Daniel H. D. Gray, Philip Arandjelovic, James McMahon, Niamh Meagher, David Price, Marc Pellegrini, Michael Roche, Sharon R. Lewin

PMC · DOI: 10.1371/journal.ppat.1013923 · PLOS Pathogens · 2026-01-29

## TL;DR

This study explores combining HIV latency reversal with drugs that promote cell death to reduce the HIV reservoir, finding only modest additional benefits.

## Contribution

The study evaluates the combined effect of latency reversal agents and pro-apoptotic drugs on HIV-infected cells, revealing model-dependent outcomes.

## Key findings

- Combining LRAs with PI3K inhibitors or venetoclax increased cell death in J-Lat10.6 cells.
- Pro-apoptotic drugs alone reduced HIV DNA in CD4+ T-cells from PWH on ART.
- The additional benefit of combining LRAs with pro-apoptotic drugs was minimal and model-dependent.

## Abstract

The persistence of latently infected CD4 + T-cells in people with HIV (PWH) on suppressive antiretroviral therapy (ART) is the major barrier to an HIV cure. We investigated the impact of two classes of pro-apoptotic drugs, phosphoinositide-3 kinases (PI3K) inhibitors or the B cell lymphoma 2 (Bcl-2) inhibitor venetoclax on depletion of latently infected CD4 + T-cells when administered ex vivo either alone or in combination with a latency reversing agents (LRA) to induce expression of pro-apoptotic viral proteins. We quantified cell death in three latently infected cell lines (J-Lat clones) and the parental cell line (Jurkat) using a live dead stain and flow cytometry. Using CD4 + T-cells isolated from blood from PWH on ART, we quantified intracellular HIV RNA, integrated HIV DNA and intact proviral DNA using quantitative PCR. In the Jat10.6 latently infected cell line, the combination of an LRA with either a PI3K inhibitor or venetoclax, compared to an LRA alone resulted in higher levels of cell death. Using CD4 + T-cells from PWH on ART, there was a significant decrease in HIV DNA following administration of wortmannin (a pan-PI3K inhibitor), venetoclax (a Bcl2 inhibitor) and JQ1 (an LRA) when administered alone. There was minimal additional effect on reservoir reduction following the addition of an LRA with a pro-apoptotic drug, compared to either an LRA or pro-apoptotic drug alone. However, when CD4 + T-cells from PWH on ART were treated with LRAs combined with a PI3K inhibitor, the fold increase in cell associated unspliced HIV RNA correlated with the decline in HIV DNA. Overall, reduction in the HIV reservoir by LRAs could be further enhanced in the presence of pro-apoptotic drugs, but the magnitude of the effect was modest, was dependent on the in vitro model used and for PI3K inhibitors, depended on the potency of latency reversal. These results are consistent with minimal additional efficacy in reservoir reduction when combining currently available LRAs and either PI3K inhibitors or venetoclax.

The persistence of long-lived HIV-infected cells in people with HIV (PWH) on antiretroviral therapy (ART) is a major obstacle to finding a cure. We hypothesised that clearance of infected cells could be enhanced by combining pro-apoptotic drugs with latency reversing agents (LRAs) which will increase expression of pro-apoptotic viral proteins. We combined a range of LRAs with two different classes of drugs that promote cell death, inhibitors of PI3K and inhibitors of B-cell lymphoma-2, and tested the effects alone and in combination on the HIV reservoir in latently infected cell lines and cells from PWH on ART. Compared to an LRA alone, the combination of an LRA with either a PI3K inhibitor or venetoclax resulted in higher levels of cell death in the J-Lat10.6 latently infected cell line. Using CD4 + T-cells from PWH on ART, both classes of pro-apoptotic drugs reduced the HIV reservoir when used alone. There was minimal additional effect on reservoir reduction following the addition of an LRA with a pro-apoptotic drug, compared to either an LRA or pro-apoptotic drug alone. Overall, reduction in the HIV reservoir by LRAs could be further enhanced only modestly in the presence of pro-apoptotic drugs, but the magnitude of the effect was dependent on the in vitro model used and for PI3K inhibitors, on the potency of latency reversal. These results are consistent with minimal additional efficacy in reservoir reduction when combining currently available LRAs and either PI3K inhibitors or venetoclax.

## Linked entities

- **Proteins:** PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), BCL2 (BCL2 apoptosis regulator)
- **Chemicals:** wortmannin (PubChem CID 312145), JQ1 (PubChem CID 46907787)

## Full-text entities

- **Genes:** BAK1 (BCL2 antagonist/killer 1) [NCBI Gene 578] {aka BAK, BAK-LIKE, BCL2L7, CDN1}, CD69 (CD69 molecule) [NCBI Gene 969] {aka AIM, BL-AC/P26, CLEC2C, EA1, GP32/28, MLR-3}, PIK3CD (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta) [NCBI Gene 5293] {aka APDS, IMD14, IMD14A, IMD14B, P110DELTA, PI3K}, NFKBIA (NFKB inhibitor alpha) [NCBI Gene 4792] {aka EDAID2, IKBA, MAD-3, NFKBI}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, PIK3CG (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma) [NCBI Gene 5294] {aka IMD97, PI3CG, PI3K, PI3Kgamma, PIK3, p110gamma}, CCR7 (C-C motif chemokine receptor 7) [NCBI Gene 1236] {aka BLR2, CC-CKR-7, CCR-7, CD197, CDw197, CMKBR7}, ICOS (inducible T cell costimulator) [NCBI Gene 29851] {aka AILIM, CD278, CVID1}, TAT (tyrosine aminotransferase) [NCBI Gene 6898], CXCR3 (C-X-C motif chemokine receptor 3) [NCBI Gene 2833] {aka CD182, CD183, CKR-L2, CMKAR3, GPR9, IP10-R}, LBR (lamin B receptor) [NCBI Gene 3930] {aka C14SR, DHCR14B, LMN2R, PHA, PHASK, TDRD18}, PRRT2 (proline rich transmembrane protein 2) [NCBI Gene 112476] {aka BFIC2, BFIS2, DSPB3, DYT10, EKD1, FICCA}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, CXCR5 (C-X-C motif chemokine receptor 5) [NCBI Gene 643] {aka BLR1, CD185, MDR15}, BCL2L11 (BCL2 like 11) [NCBI Gene 10018] {aka BAM, BIM, BOD}, Cd4 (CD4 antigen) [NCBI Gene 12504] {aka L3T4, Ly-4}, CD38 (CD38 molecule) [NCBI Gene 952] {aka ADPRC 1, ADPRC1, cADPR1}, CCR6 (C-C motif chemokine receptor 6) [NCBI Gene 1235] {aka BN-1, C-C CKR-6, CC-CKR-6, CCR-6, CD196, CKR-L3}, IL7R (interleukin 7 receptor) [NCBI Gene 3575] {aka CD127, CDW127, IL-7R-alpha, IL-7Ralpha, IL7RA, IL7Ralpha}, MCL1 (MCL1 apoptosis regulator, BCL2 family member) [NCBI Gene 4170] {aka BCL2L3, EAT, MCL1-ES, MCL1L, MCL1S, Mcl-1}, PDCD1 (programmed cell death 1) [NCBI Gene 5133] {aka ADMIO4, AIMTBS, CD279, PD-1, PD1, SLEB2}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, CD28 (CD28 molecule) [NCBI Gene 940] {aka IMD123, Tp44}, BCL2L1 (BCL2 like 1) [NCBI Gene 598] {aka BCL-XL/S, BCL2L, BCLX, Bcl-X, PPP1R52}, PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290] {aka CCM4, CLAPO, CLOVE, CWS5, HMH, MCAP}, ERVK-6 (endogenous retrovirus group K member 6, envelope) [NCBI Gene 64006] {aka ERVK6, HERV-K(C7), HERV-K108, K-Rev, c-orf, cORF}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, CCR5 (C-C motif chemokine receptor 5) [NCBI Gene 1234] {aka CC-CKR-5, CCCKR5, CCR-5, CD195, CKR-5, CKR5}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, CCR4 (C-C motif chemokine receptor 4) [NCBI Gene 1233] {aka CC-CKR-4, CD194, CKR4, CMKBR4, ChemR13, HGCN:14099}, IL2RA (interleukin 2 receptor subunit alpha) [NCBI Gene 3559] {aka CD25, IDDM10, IL2R, IMD41, TCGFR, p55}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, CD19 (CD19 molecule) [NCBI Gene 930] {aka B4, CVID3}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, IL2 (interleukin 2) [NCBI Gene 3558] {aka IL-2, TCGF, lymphokine}, CD27 (CD27 molecule) [NCBI Gene 939] {aka S152, S152. LPFS2, T14, TNFRSF7, Tp55}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}
- **Diseases:** AIDS (MESH:D000163), death (MESH:D003643), follicular B-cell non-Hodgkin lymphoma (MESH:D016393), follicular lymphoma (MESH:D008224), chronic lymphocytic leukemia (MESH:D015451), breast cancer (MESH:D001943), inflammatory (MESH:D007249), cutaneous T-cell lymphoma (MESH:D016410), infected (MESH:D007239), small lymphocytic leukemia (MESH:D007945), myeloma (MESH:D009101), HIV (MESH:D015658), T-cell derived cancer (MESH:D009369), Toxicity (MESH:D064420)
- **Chemicals:** DMSO (MESH:D004121), EDTA (MESH:D004492), streptomycin (MESH:D013307), IdU (MESH:D007065), penicillin (MESH:D010406), FK228 (MESH:C087123), Palladium (MESH:D010165), paraformaldehyde (MESH:C003043), Triton-X (MESH:D017830), KY12420 (MESH:D000077191), raltegravir (MESH:D000068898), fimepinostat (MESH:C000723994), depsipeptide (MESH:D047630), reactive oxygen species (MESH:D017382), cisplatin (MESH:D002945), Idelalisib (MESH:C552946), CO2 (MESH:D002245), H2O (MESH:D014867), BRY (MESH:D054713), LBH589 (MESH:D000077767), Alpelisib (MESH:C585539), SDS (MESH:D012967), IONO (MESH:D015759), Duvelisib (MESH:C586691), HCl (MESH:D006851), CUDC-907 (MESH:C576940), MK0683 (MESH:D000077337), L-glutamine (MESH:D005973), ABT-199 (MESH:C579720), 10nM (-), Copanlisib (MESH:C000589253)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Human immunodeficiency virus 1 (no rank) [taxon 11676]
- **Cell lines:** Jurkat — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_0065), J-Lat T- — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_8285), 15.4 — Mus musculus (Mouse), Transformed cell line (CVCL_LK59), J-Lat — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_8280), -Lat10.6 — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_8281), J-Lat15.4 — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_8282), HEK — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_M624), T — Homo sapiens (Human), Esophageal squamous cell carcinoma, Cancer cell line (CVCL_3174), H9291 — Rattus norvegicus (Rat), Adenocarcinoma of the rat prostate, Cancer cell line (CVCL_Y658), 6.3 — Mus musculus (Mouse), Hybridoma (CVCL_A8II), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), KMS-12-PE — Homo sapiens (Human), Plasma cell myeloma, Cancer cell line (CVCL_1333), Jat10.6 — Mus musculus (Mouse), Hybridoma (CVCL_C2JD)

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## References

74 references — full list in the complete paper: https://tomesphere.com/paper/PMC12880745/full.md

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Source: https://tomesphere.com/paper/PMC12880745