# Isolation, molecular profiling, and antimicrobial sensitivity patterns of ESBL producing Acinetobacter baumannii in wastewater discharges from Goranchatbari sub-catchment area in Dhaka

**Authors:** Amanta Rahman, Nayeema Haque, Mohammed Tanveer Hussain, Md. Sakib Hossain, Ahmed Ishtiaque Amin Chowdhury, Md. Foysal Abedin, Tahani Tabassum, Md. Hajbiur Rahman, Mohammad Atique Ul Alam, Mohammad Rafiqul Islam, Iftekhar Bin Naser, Md. Shafiqul Islam, Zahid Hayat Mahmud

PMC · DOI: 10.1371/journal.pone.0341652 · PLOS One · 2026-02-06

## TL;DR

This study examines ESBL-producing Acinetobacter baumannii in wastewater from Dhaka, finding high prevalence and resistance patterns, highlighting the need for environmental health policy changes.

## Contribution

The study provides new insights into the molecular and antimicrobial resistance profiles of ESBL-producing A. baumannii in wastewater from a specific sub-catchment area in Dhaka.

## Key findings

- 42.6% of sample isolates were positive for ESBL production, with 74.2% genotypically confirmed as Acinetobacter baumannii.
- blaTEM was the most prevalent β-lactamase gene, and pgaB and bfmS were the most common pathogenic genes among isolates.
- High intermediate resistance to cefotaxime and ceftriaxone was observed, with significant biofilm formation at both 37°C and 25°C.

## Abstract

The World Health Organization has recommended the development of new antimicrobials against Acinetobacter baumannii, one of the six highly significant pathogens. In this study, 28 wastewater samples were collected from the Goranchatbari sub-catchment area in Dhaka city over several periods. The samples were characterized for the presence of Acinetobacter spp. The isolates showing cream, opaque colonies on CHROMagarTM ESBL plates were considered positive for ESBL production. They were further characterized for major antibiotic resistance and pathogenic genes, biofilm production and antibiotic susceptibility testing. Furthermore, the isolates were phylogenetically clustered based on their Enterobacterial Repetitive Intergenic Consensus (ERIC) profiles and correlation matrix analysis was performed. Out of 28 samples, 27 were positive for Acinetobacter spp. and a total of 106/249 (42.6%) sample representative isolates were positive for ESBL production. Out of these 106 isolates, 97 (91.5%) were genotypically confirmed to belong to the Acinetobacter spp. and of which, 72 (74.2%) were genotypically confirmed as Acinetobacter baumannii. Among the distribution of β-lactamase genes, blaTEM was the most prevalent being present in 40/72 (55.6%) isolates, followed by blaSHV in 3/72 (4.2%) isolates. With respect to the pathogenic genes, pgaB and bfmS were the most prevalent being present in 80.6% and 69.4% of the isolates, respectively. The antibiotic susceptibility testing revealed a diverse range of resistance patterns with high levels of intermediate resistance being observed for cefotaxime and ceftriaxone. The biofilm formation screening revealed that 48.6% and 44.4% of isolates formed strong biofilms at 37°C and 25°C, respectively. The phylogenetic clustering of the A. baumannii isolates resulted in the formation of 10 clusters at 60% similarity index, and the correlation matrix helped reveal important associations between genotypic and phenotypic traits. These results demonstrate the continued prevalence of A. baumannii within these environmental reservoirs and its ability to persist despite seasonal variations, prioritizing changes in environmental health policies that aim to reduce the widespread prevalence of these pathogens.

## Linked entities

- **Genes:** bla SHV (class A extended-spectrum beta-lactamase SHV-2) [NCBI Gene 40101717], pgaB (poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase outer membrane export lipoprotein) [NCBI Gene 912831], bfmS (protein BfmS) [NCBI Gene 878756]
- **Species:** Acinetobacter sp. P (taxon 596119), Acinetobacter baumannii (taxon 470)

## Full-text entities

- **Diseases:** AMR (MESH:D060467), A. baumannii infections (MESH:D007239), MDR (MESH:D018088), -acquired (MESH:D003638), COVID-19 (MESH:D000086382), deaths (MESH:D003643)
- **Chemicals:** meropenem (MESH:D000077731), glycerol (MESH:D005990), NTC (-), gentamicin (MESH:D005839), cefotaxime (MESH:D002439), ceftriaxone (MESH:D002443), carbapenem (MESH:D015780), TE (MESH:D013691), cefepime (MESH:D000077723), tetracycline (MESH:D013752), aminoglycosides (MESH:D000617), oxacillin (MESH:D010068), IMP (MESH:D007291), fluoroquinolones (MESH:D024841), cephalosporins (MESH:D002511), FEP (MESH:D011138), imipenem (MESH:D015378), EDTA (MESH:D004492), poly-beta-(1,6)-N-acetyl glucosamine (MESH:C505465), NaCl (MESH:D012965), beta-lactams (MESH:D047090), ciprofloxacin (MESH:D002939), amikacin (MESH:D000583), piperacillin-tazobactam (MESH:D000077725), cotrimoxazole (MESH:D015662), agarose (MESH:D012685)
- **Species:** Klebsiella pneumoniae (species) [taxon 573], Escherichia coli ATCC 25922 (strain) [taxon 1322345], Homo sapiens (human, species) [taxon 9606], Pseudomonas aeruginosa (species) [taxon 287], Staphylococcus aureus (species) [taxon 1280], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Acinetobacter baumannii (species) [taxon 470], Enterococcus faecium (species) [taxon 1352]

## Full text

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## Figures

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## References

63 references — full list in the complete paper: https://tomesphere.com/paper/PMC12880640/full.md

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Source: https://tomesphere.com/paper/PMC12880640