# Spontaneous somatic Pten loss contributes to functional heterogeneity of T cells

**Authors:** Allen Y. Chen, Alexander Y. Rudensky

PMC · DOI: 10.1038/s41598-025-34754-1 · Scientific Reports · 2026-01-12

## TL;DR

Healthy mice naturally have T cells with reduced Pten, which affects how these immune cells respond to viral infections.

## Contribution

This study reveals that spontaneous Pten loss in T cells influences their differentiation without causing disease.

## Key findings

- T cells with low Pten expression are common in healthy mice.
- Monoallelic Pten loss biases CD4 T cells toward becoming T follicular helper cells during viral infection.
- This genetic variation does not lead to autoimmune or inflammatory diseases.

## Abstract

We found that healthy mice harbor T cells with heritable low Pten expression and that monoallelic Pten loss in CD4 T cells causes a bias in their differentiation toward T follicular helper cells during acute viral infection. These results suggest that somatically induced mono- or biallelic loss of expression of signaling-related genes in T cells can impact the quality of population-level T cell responses—without conspicuous pathological sequelae such as autoimmune and inflammatory manifestations or lymphomagenesis.

The online version contains supplementary material available at 10.1038/s41598-025-34754-1.

## Linked entities

- **Genes:** PTEN (phosphatase and tensin homolog) [NCBI Gene 5728]
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, TBX21 (T-box transcription factor 21) [NCBI Gene 30009] {aka IMD88, T-PET, T-bet, TBET, TBLYM}, Pten (phosphatase and tensin homolog) [NCBI Gene 19211] {aka 2310035O07Rik, A130070J02Rik, B430203M17Rik, MMAC1, PTENbeta, TEP1}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56717] {aka 2610315D21Rik, FRAP, FRAP2, Frap1, RAFT1, RAPT1}, IL2RA (interleukin 2 receptor subunit alpha) [NCBI Gene 3559] {aka CD25, IDDM10, IL2R, IMD41, TCGFR, p55}, ITGAX (integrin subunit alpha X) [NCBI Gene 3687] {aka CD11C, SLEB6}, Tcrd (T cell receptor delta chain) [NCBI Gene 110066] {aka Tcrdelta}, SELP (selectin P) [NCBI Gene 6403] {aka CD62, CD62P, GMP140, GRMP, LECAM3, PADGEM}, PTEN (phosphatase and tensin homolog) [NCBI Gene 5728] {aka 10q23del, BZS, CWS1, DEC, GLM2, MHAM}, TRB (T cell receptor beta locus) [NCBI Gene 6957] {aka TCRB, TRB@}, Furin (furin, paired basic amino acid cleaving enzyme) [NCBI Gene 18550] {aka 9130404I01Rik, Fur, PACE, Pcsk3, SPC1}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, CXCR5 (C-X-C motif chemokine receptor 5) [NCBI Gene 643] {aka BLR1, CD185, MDR15}, Tcrb (T cell receptor beta chain) [NCBI Gene 21577] {aka TCRbeta, Tib}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, SELL (selectin L) [NCBI Gene 6402] {aka CD62L, LAM1, LECAM1, LEU8, LNHR, LSEL}, Cd1 (CD1 antigen complex) [NCBI Gene 111334], Cd4 (CD4 antigen) [NCBI Gene 12504] {aka L3T4, Ly-4}, GATA3 (GATA binding protein 3) [NCBI Gene 2625] {aka HDR, HDRS}, Rnase1 (ribonuclease, RNase A family, 1 (pancreatic)) [NCBI Gene 19752] {aka Rib-1, Rib1}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, RNF130 (ring finger protein 130) [NCBI Gene 55819] {aka G1RP, G1RZFP, GOLIATH, GP}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, CXCR3 (C-X-C motif chemokine receptor 3) [NCBI Gene 2833] {aka CD182, CD183, CKR-L2, CMKAR3, GPR9, IP10-R}, Ptprc (protein tyrosine phosphatase receptor type C) [NCBI Gene 19264] {aka B220, CD45R, Cd45, L-CA, Ly-5, Lyt-4}, CD80 (CD80 molecule) [NCBI Gene 941] {aka B7, B7-1, B7.1, BB1, CD28LG, CD28LG1}, ITGAM (integrin subunit alpha M) [NCBI Gene 3684] {aka CD11B, CR3A, HNA-4, MAC-1, MAC1A, MO1A}, BCL6 (BCL6 transcription repressor) [NCBI Gene 604] {aka BCL5, BCL6A, LAZ3, ZBTB27, ZNF51}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}
- **Diseases:** ES (MESH:D012512), lymphoid malignancies (MESH:D008223), T cell-deficient (MESH:D016399), Cancer (MESH:D009369), infection (MESH:D007239), autoimmune and inflammatory manifestations (MESH:D007249), follicular lymphoma (MESH:D008224), LCMV infection (MESH:D008216), NOD (MESH:D003920), viral infection (MESH:D014777), SLO (MESH:D019082)
- **Chemicals:** dUTP (MESH:C027078), ACK (-), G418 (MESH:C010680), corn oil (MESH:D003314), carbon dioxide (MESH:D002245), PBS (MESH:D007854), TAM (MESH:D013629)
- **Species:** Homo sapiens (human, species) [taxon 9606], LCMV [taxon 11623], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** T > G, c.2T > G, T2A
- **Cell lines:** -16s — Mus musculus (Mouse), Hybridoma (CVCL_U609), PC61.5 — Mus musculus (Mouse), Hybridoma (CVCL_4550), PK136 — Mus musculus (Mouse), Hybridoma (CVCL_7695), ES — Homo sapiens (Human), Embryonic stem cell (CVCL_C769), /6J — Homo sapiens (Human), Cutaneous melanoma, Cancer cell line (CVCL_W797), 4B10 — Mus musculus (Mouse), Hybridoma (CVCL_B0GF), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU), SLO — Spodoptera litura (Asian cotton leafworm), Spontaneously immortalized cell line (CVCL_Z346)

## Full text

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## Figures

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Source: https://tomesphere.com/paper/PMC12877033