# Microbial degradation of phenol and derivatives using environmental isolates from industrial waste sources

**Authors:** Selin Saricayir, Tayyibe Alpay, Bike Pashayeva, Ayhan Ezdesir, Guven Ozdemir

PMC · DOI: 10.1007/s10482-026-02259-0 · Antonie Van Leeuwenhoek · 2026-02-05

## TL;DR

This study identifies two bacteria that can degrade phenol and related pollutants, showing better performance when used together for treating industrial wastewater.

## Contribution

The study identifies two novel phenol-degrading bacterial isolates and demonstrates enhanced degradation through microbial consortia.

## Key findings

- Two phenol-tolerant isolates, Microbacterium arabinogalactanolyticum and Brevundimonas diminuta, completely degraded phenol within 120 hours.
- A microbial consortium of the two isolates achieved complete degradation of 2,4-dinitrophenol within 12 hours and phenol removal within 60 hours.
- The mixed culture removed 73–78% of remaining phenolic derivatives, indicating cooperative metabolic interactions.

## Abstract

This study investigates the microbial degradation of phenolic compounds using environmental bacterial isolates obtained from refinery wastewater and petroleum-contaminated soil. Phenolic pollutants are highly toxic and persistent, posing significant challenges for biological wastewater treatment systems. To address this issue, microorganisms were enriched under increasing phenolic loads using Bushnell Haas Yeast (BHY) medium supplemented with phenol and mixed phenolic derivatives as the sole carbon source. Through adaptive passaging, two phenol-tolerant isolates were obtained and identified by 16S rRNA sequencing as Microbacterium arabinogalactanolyticum (PKN7) and Brevundimonas diminuta (VGT4). Time-resolved HPLC analyses demonstrated that both isolates completely degraded phenol within 120 h in BHY medium containing 20 mg/L phenol and 30 mg/L mixed phenolic compounds. While the strains exhibited only partial degradation of chlorophenols and cresols, consortium experiments showed enhanced performance in the mixed culture: the mixed culture achieved complete degradation of 2,4-dinitrophenol within 12 h and complete phenol removal within 60 h, while removing 73–78% of the remaining phenolic derivatives. These results confirm that cooperative metabolic interactions substantially enhance degradation performance under mixed-pollutant conditions. Overall, this study identifies M. arabinogalactanolyticum and B. diminuta as promising non-model phenol degraders, particularly when applied as a defined microbial consortium. Their combined activity highlights the potential for bioaugmentation-based strategies in industrial wastewater treatment systems. Further pilot-scale studies using real refinery effluents are needed to evaluate long-term stability and field applicability.

## Linked entities

- **Chemicals:** phenol (PubChem CID 996), chlorophenols (PubChem CID 6028), 2,4-dinitrophenol (PubChem CID 1493)
- **Species:** Microbacterium arabinogalactanolyticum (taxon 69365), Brevundimonas diminuta (taxon 293)

## Full-text entities

- **Diseases:** toxicity (MESH:D064420), carcinogenic (MESH:D011230), activated sludge (OMIM:612348)
- **Chemicals:** 2,4-dichlorophenol (MESH:C004762), m-cresol (MESH:C042041), 2,4-dinitrophenol (MESH:D019297), Bushnell Haas Broth (-), 2,3-dichlorophenol (MESH:C091932), 2,5-dichlorophenol (MESH:C056892), p-cresol (MESH:C032538), agarose (MESH:D012685), chlorophenols (MESH:D002733), water (MESH:D014867), 3,4-dichlorophenol (MESH:C043374), Phenol (MESH:D019800), Acetic acid (MESH:D019342), Phenols (MESH:D010636), carbon (MESH:D002244), cresols (MESH:D003408), o-cresol (MESH:C034047)
- **Species:** Microbacterium (genus) [taxon 33882], Pseudomonas putida (species) [taxon 303], activated sludge metagenome (species) [taxon 942017], Brevundimonas diminuta (species) [taxon 293], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Klebsiella variicola (species) [taxon 244366], Rhodococcus opacus (species) [taxon 37919], Glycine max (soybean, species) [taxon 3847], Homo sapiens (human, species) [taxon 9606], Pseudomonas aeruginosa (species) [taxon 287], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Rhodococcus pyridinivorans (species) [taxon 103816], Microbacterium arabinogalactanolyticum (species) [taxon 69365]

## Full text

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Source: https://tomesphere.com/paper/PMC12876542