# Comprehensive machine learning and experimental verification reveal the mechanism of action of autophagy-related genes FIZ1 and FBXO21 in acute kidney injury

**Authors:** Yunqi Bai, Lili Zhang, Bo Nie, Yixin Su, Jingwei Zhou

PMC · DOI: 10.7717/peerj.20707 · PeerJ · 2026-02-02

## TL;DR

This study uses machine learning and experiments to identify FIZ1 and FBXO21 as potential biomarkers for acute kidney injury, linking them to autophagy and mitochondrial changes.

## Contribution

The study introduces FIZ1 and FBXO21 as novel autophagy-related biomarkers for acute kidney injury with high diagnostic potential.

## Key findings

- FIZ1 and FBXO21 were identified as core autophagy-related genes with AUC values exceeding 0.7 in AKI diagnosis.
- Cisplatin-induced AKI rat models showed mitochondrial damage and altered FIZ1/FBXO21 expression levels.
- Immune analysis revealed reduced resting mast cells in AKI samples compared to normal samples.

## Abstract

Acute kidney injury (AKI) is a serious disease with a high incidence and easy induction. The search for innovative biomarkers and treatment methods is of great significance for improving the prognosis of patients. Autophagy is closely related to the occurrence and development of AKI. This study aims to explore the role of autophagy-related genes (ARGs) as potential biomarkers and therapeutic targets in AKI.

In this study, the gene microarray data of the GEO dataset were used to explore the molecular profile of AKI, and three machine learning algorithms were used to screen autophagy-related feature genes. To further validate the reliability of the screening results, we constructed a cisplatin-induced AKI rat model to validate potential biomarkers of machine learning screening.

Machine learning analysis identified 17 differentially expressed ARGs and selected the core genes FIZ1 and FBXO21, with area under curve (AUC) values both exceeding 0.7 (95% CI [0.706–0.899]). Immune analysis revealed that the number of Mast cells resting significantly decreased in AKI samples compared to normal samples (P < 0.05). Electron microscopy observations of the cisplatin-induced AKI rat model indicated thickening of the basement membrane, fusion of foot processes, and swelling and rupture of mitochondria in the model group, suggesting a correlation between AKI and mitochondrial autophagy; Western blot results indicated a significant increase in the expression of FIZ1 and a significant decrease in FBXO21 in the AKI group (P < 0.01). The results of IHC staining were also consistent with those of Western blot results.

This study highlights the significant role of ARGs in AKI and identifies FIZ1 and FBXO21 as promising biomarkers with high diagnostic potential, offering new insights into the molecular mechanisms underlying AKI.

## Linked entities

- **Genes:** FIZ1 (FLT3 interacting zinc finger 1) [NCBI Gene 84922], FBXO21 (F-box protein 21) [NCBI Gene 23014]
- **Chemicals:** cisplatin (PubChem CID 5460033)
- **Diseases:** acute kidney injury (MONDO:0002492)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Fbxo21 (F-box protein 21) [NCBI Gene 360818], Fiz1 (FLT3-interacting zinc finger 1) [NCBI Gene 292584] {aka RGD1306359}
- **Diseases:** AKI (MESH:D058186)
- **Chemicals:** cisplatin (MESH:D002945)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

59 references — full list in the complete paper: https://tomesphere.com/paper/PMC12875250/full.md

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Source: https://tomesphere.com/paper/PMC12875250