Long‐term culture of skin biopsies: maintenance of fibroblast production and competency of reprogramming

TL;DR

This study shows that skin biopsies can be cultured long-term to produce fibroblasts that retain their function and can still be reprogrammed into stem cells.

Contribution

The study demonstrates that fibroblasts from long-term cultured skin biopsies retain reprogramming competency despite extended culture.

Findings

Fibroblasts cultured for up to 16 months maintained morphology and physiology but showed reduced proliferation rates.

Transcriptional changes occurred with long-term culture, but no major DNA deletions or amplifications were detected.

Fibroblasts from 16-month cultures retained the ability to be reprogrammed into induced pluripotent stem cells.

Abstract

Primary fibroblasts are widely used in a variety of experimental and therapeutic studies. Patient‐derived skin biopsies are an accessible way to generate dermal fibroblasts for wound and burn therapeutics and can be easily reprogrammed to induced pluripotent stem cells (iPSCs). Despite the increasing use and interest in skin biopsies, there is limited information regarding the culturing potential of a single biopsy and the effects of extended culture on fibroblast formation and reprogramming potential. To better understand the potential of long‐term skin biopsy culture, we cultured biopsy samples for 6–16 months, resulting in 6–16 generations of explant reculturing and then analyzed subsequent generations of fibroblasts. Our results showed that fibroblast morphology and physiology are maintained over time, but although older generations remained proliferative, they did so at a decreased rate. Gene expression analyses uncovered transcriptional changes with long‐term skin culture, but deep DNA sequencing did not reveal any large deletions or amplifications. Spontaneous DNA mutations in fibroblast generations appeared to be random and not enriched for any specific signaling pathways. Importantly, fibroblasts generated after 16 months and over 16 generations in explant culture retained competency for reprogramming into induced pluripotent stem cells. Taken together, our results support long‐term culture of skin biopsies to generate large numbers of primary fibroblasts. These cells maintain their identity and integrity, enabling the study of fibroblast maintenance as well as rare human disorders.

Skin biopsies taken from a patient with an ultra‐rare disorder as well as controls were cultured for up to 473 days. The chunks of skin were serially transferred to a new culture plate when confluent with fibroblasts. Different generations of fibroblasts were analyzed for cell and molecular properties, proliferation, and competence for reprogramming to induced pluripotent stem cells.

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