# A role for PaxB in regulating blebbing: experimental insights and theoretical perspectives from Dictyostelium discoideum

**Authors:** Zully Santiago, Brian Wey, Sobana Handi Dinuka Sewwandi de Silva, Jessica Reznik, Lamina Siby, Emmanuel Asante-Asamani, Derrick Brazill

PMC · DOI: 10.21203/rs.3.rs-8554870/v1 · Research Square · 2026-01-19

## TL;DR

This study explores how PaxB regulates blebbing in Dictyostelium cells under compression, combining experiments and theory to reveal its role in cell movement.

## Contribution

The paper identifies a new role for PaxB in regulating bleb size during chemotaxis under compression.

## Key findings

- PaxB− cells produce larger blebs under high compression compared to wild-type cells.
- PaxB modulates cortex reformation quality, affecting bleb size during cell movement.
- A mathematical model supports the experimental results, showing cortex assembly rate influences bleb size.

## Abstract

Eukaryotic cells migrate using pressure-driven blebs or actin polymerization driven pseudopods, with cells preferring to bleb in compressed environments where high protrusion forces are required for movement. In mammals, paxillin is a focal adhesion protein that acts as a scaffold, linking integrins to the actin cytoskeleton and recruiting signaling molecules that regulate adhesion, cytoskeletal remodeling, and migration. Dictyostelium possesses a paxillin ortholog, PaxB, which shares conserved domains with mammalian paxillin and participates in processes such as adhesion, cytokinesis, development,and chemotaxis. However, the role of PaxB in blebbing is not well understood. Our work combines experimental and theoretical methods to elucidate the role of PaxB in blebbing. We use an under-agarose assay to collect data on paxB− and wild-type cells under low and high compression and observe blebbing characteristics such as area and frequency. Our results point to a role for PaxB in regulating the relative size of blebs in response to increased compression through modulating the quality of the newly reformed cortex. Using a mathematical model, we show that decreasing the assembly rate of the cortex during bleb formation leads to relatively larger blebs, thus supporting our experimental findings. Together, our experiments and theory suggest a new role of PaxB in bleb-based chemotaxis.

## Linked entities

- **Genes:** DMBX1 (diencephalon/mesencephalon homeobox 1) [NCBI Gene 127343]
- **Proteins:** LOC575064 (leupaxin), DMBX1 (diencephalon/mesencephalon homeobox 1)
- **Species:** Dictyostelium discoideum (taxon 44689)

## Full-text entities

- **Chemicals:** agarose (MESH:D012685)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12869658/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12869658/full.md

## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC12869658/full.md

---
Source: https://tomesphere.com/paper/PMC12869658