# Leveraging the shared and opposing genetic mechanisms in the heritable cardiomyopathies

**Authors:** Daria R. Kramarenko, Poeya Haydarlou, George J. Powell, Joel T. Rämö, Riyad Janan, Claire Prince, Dominic S. Zimmerman, Pantazis Theotokis, Prisca K. Thami, Jan Haas, Sophie Garnier, Frank Rühle, Edwin Poel, Amand F. Schmidt, Sharlene Day, Adam Helms, Rachel Lampert, Victoria Parikh, Jodie Ingles, Iacopo Olivotto, Neal Lakdawala, Anjali Owens, Sara Saberi, John Stendhal, Euan Ashley, Belinda Gray, Mark W. Russell, Thomas D Ryan, Joseph W. Rossano, Dominic Abrams, Erin Miller, Kimberly Lin, Niccolo Maurizi, Alessia Argiro, Colin Berry, Rob Cooper, Andrew S. Flett, Roy S. Gardner, John P. Greenwood, Brian P. Halliday, David Hutchings, Masliza Mahmod, Gerry P. McCann, Stephen P. Page, Charles Peebles, Betty Raman, Peter Swoboda, Amanda Varnava, David Wright, Sanjay Prasad, Stuart Cook, Upsala (Paz) Tayal, Rachel Buchan, Roddy Walsh, Arthur A. M. Wilde, Benjamin Meder, Philippe Charron, Anuj Goel, Ahmad S. Amin, Patrick T. Ellinor, Krishna G. Aragam, Rafik Tadros, Yigal M. Pinto, Carolyn Y. Ho, Hugh Watkins, James S. Ware, Connie R. Bezzina, Sean J. Jurgens

PMC · DOI: 10.21203/rs.3.rs-8346032/v1 · Research Square · 2026-01-27

## TL;DR

This study explores the genetic differences and similarities between two heart diseases, DCM and HCM, revealing shared and opposing genetic factors that could lead to better treatments.

## Contribution

The study identifies 100 genetic loci (17 novel) that distinguish DCM and HCM, revealing both opposing and shared genetic mechanisms.

## Key findings

- DCM and HCM show largely inverse genetic associations across multiple genomic levels.
- Polygenic risk scores derived from these loci strongly discriminate between DCM and HCM patients (AUC 0.78–0.84).
- A shared-effect analysis identifies a single locus near CASQ2 and a concordant genomic component linked to cardiometabolic health.

## Abstract

Dilated cardiomyopathy (DCM) and hypertrophic cardiomyopathy (HCM) are heart muscle diseases with largely opposing structural and functional phenotypes. Yet, both may lead to the same devastating outcomes of advanced heart failure and life-threatening arrhythmias. Using genome-wide association data from 9,365 DCM cases, 5,900 HCM cases, and over 1.2 million controls, we show that DCM and HCM are largely inversely associated across multiple genomic levels. Modeling both disorders as opposing genetic entities, in case-case GWAS approaches, we identify 100 loci (17 novel) underlying the cardiomyopathy spectrum. Several loci map to potential therapeutic targets (e.g., ADM, CACNA2D2), and polygenic risk scores derived from these data show strong discrimination between DCM and HCM patients in external datasets (AUC 0.78–0.84; AUPRC ~ 0.85). The pervasive opposing associations suggest that cardiomyocyte-directed therapies may often have opposite effects in DCM versus HCM. Nevertheless, a shared-effect analysis reveals a single locus — near the calcium-buffering gene CASQ2 — and also identifies a concordant genomic component associated with cardiometabolic health and extracardiac risk factors. By leveraging the shared and opposing genetic mechanisms of DCM and HCM, our work defines the genomic architecture of major cardiomyopathy subtypes and suggests new directions for therapeutics and precision medicine in heart failure.

## Linked entities

- **Genes:** ADM (adrenomedullin) [NCBI Gene 133], CACNA2D2 (calcium voltage-gated channel auxiliary subunit alpha2delta 2) [NCBI Gene 9254], CASQ2 (calsequestrin 2) [NCBI Gene 845]
- **Diseases:** dilated cardiomyopathy (MONDO:0005021), hypertrophic cardiomyopathy (MONDO:0005045), heart failure (MONDO:0005252)

## Full-text entities

- **Genes:** DTL (denticleless E3 ubiquitin protein ligase adapter) [NCBI Gene 51514] {aka CDT2, DCAF2, L2DTL, RAMP}, mypn (myopalladin) [NCBI Gene 571695] {aka wu:fc17a02}, NEXN (nexilin F-actin binding protein) [NCBI Gene 91624] {aka CDM2M, CMH20, NELIN}, APOB (apolipoprotein B) [NCBI Gene 338] {aka FCHL2, FLDB, LDLCQ4, apoB-100, apoB-48}, adma (adrenomedullin a) [NCBI Gene 556502], SCN5A (sodium voltage-gated channel alpha subunit 5) [NCBI Gene 6331] {aka CDCD2, CMD1E, CMPD2, HB1, HB2, HBBD}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}, ldb2b (LIM domain binding 2b) [NCBI Gene 30578] {aka ldb2l, ldb3, wu:fd16f11, zgc:92548}, PRDM16 (PR/SET domain 16) [NCBI Gene 63976] {aka CMD1LL, KMT8F, LVNC8, MEL1, PFM13}, hspg2 (heparan sulfate proteoglycan 2) [NCBI Gene 565429], cryaba (crystallin, alpha B, a) [NCBI Gene 30393] {aka cryab}, ELL (elongation factor for RNA polymerase II) [NCBI Gene 8178] {aka C19orf17, ELL1, MEN, PPP1R68}, CACNA2D2 (calcium voltage-gated channel auxiliary subunit alpha2delta 2) [NCBI Gene 9254] {aka CACNA2D, CASVDD}, HSPB7 (heat shock protein family B (small) member 7) [NCBI Gene 27129] {aka cvHSP}, NOS1AP (nitric oxide synthase 1 adaptor protein) [NCBI Gene 9722] {aka 6330408P19Rik, CAPON, NPHS22}, Casq2 (calsequestrin 2) [NCBI Gene 12373] {aka Csq2, ESTM52, cCSQ}, SMARCB1 (SWI/SNF related BAF chromatin remodeling complex subunit B1) [NCBI Gene 6598] {aka BAF47, CSS3, INI-1, INI1, MRD15, PPP1R144}, cacna2d2a (calcium channel, voltage-dependent, alpha 2/delta subunit 2a) [NCBI Gene 541376] {aka cacna2d2, si:dkey-18h3.3, zgc:113325}, BATF3 (basic leucine zipper ATF-like transcription factor 3) [NCBI Gene 55509] {aka JDP1, JUNDM1, SNFT}, PLK2 (polo like kinase 2) [NCBI Gene 10769] {aka SNK, hPlk2, hSNK}, MYH14 (myosin heavy chain 14) [NCBI Gene 79784] {aka DFNA4, DFNA4A, FP17425, MHC16, MYH17, NMHC II-C}, kat2b (K(lysine) acetyltransferase 2B) [NCBI Gene 563942] {aka P/CAF, pcaf, si:ch211-1j13.2, zgc:161980}, TKT (transketolase) [NCBI Gene 7086] {aka HEL-S-48, HEL107, SDDHD, TK, TKT1}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, FHOD3 (formin homology 2 domain containing 3) [NCBI Gene 80206] {aka CMH28, FHOS2, Formactin2}, ADM (adrenomedullin) [NCBI Gene 133] {aka AM, PAMP}, LPA (lipoprotein(a)) [NCBI Gene 4018] {aka AK38, APOA, LP}, CMPK1 (cytidine/uridine monophosphate kinase 1) [NCBI Gene 51727] {aka CK, CMK, CMPK, UMK, UMP-CMPK, UMPK}, FBXO32 (F-box protein 32) [NCBI Gene 114907] {aka Fbx32, MAFbx}, OBSCN (obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF) [NCBI Gene 84033] {aka ARHGEF30, RHABDO1, UNC89}, MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885] {aka CSCF, FMD2, MEKK7, TAK1, TGF1a}, NFATC3 (nuclear factor of activated T cells 3) [NCBI Gene 4775] {aka NF-AT4c, NFAT4, NFATX, n339260}, MYBPC3 (myosin binding protein C3) [NCBI Gene 4607] {aka CMD1MM, CMH4, FHC, LVNC10, MYBP-C, cMyBP-C}, PGR (progesterone receptor) [NCBI Gene 5241] {aka NR3C3, PR}, CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026] {aka CAP20, CDKN1, CIP1, MDA-6, P21, SDI1}, BAG3 (BAG cochaperone 3) [NCBI Gene 9531] {aka BAG-3, BIS, CAIR-1, CMD1HH, CMT2JJ, HMND15}, CASQ2 (calsequestrin 2) [NCBI Gene 845] {aka PDIB2}, PKP2 (plakophilin 2) [NCBI Gene 5318] {aka ARVD9}, PDE3A (phosphodiesterase 3A) [NCBI Gene 5139] {aka CGI-PDE, CGI-PDE A, CGI-PDE-A, HTNB}
- **Diseases:** cardiomyocyte hypertrophy (MESH:D006984), bradycardia (MESH:D001919), Long QT syndrome (MESH:D008133), HCM (MESH:D002312), Cardiomyopathies (MESH:D009202), arrhythmia (MESH:D001145), cardiac MRI (MESH:D006331), Atrial fibrillation (MESH:D001281), Cardiometabolic (MESH:D024821), arrhythmogenic cardiomyopathy (MESH:D019571), MTAG (MESH:D042822), heart failure (MESH:D006333), LV end systole (MESH:D018487), Cardiovascular Disease (MESH:D002318), sepsis (MESH:D018805), arrhythmic (OMIM:212500), vascular/blood disorders (MESH:D001778), DCM (MESH:D002311), cancer (MESH:D009369), cardiac abnormalities (MESH:D018376), ventricular tachycardia (MESH:D017180), muscle disorders (MESH:D009135), genetic disease (MESH:D030342), heritable cardiomyopathies (MESH:D065627), obesity (MESH:D009765), HYPERTENSION (MESH:D006973), sudden death (MESH:D003645)
- **Chemicals:** cholesterol (MESH:D002784), Adrecizumab (MESH:C000706631), Triglyceride (MESH:D014280), milrinone (MESH:D020105), TG (MESH:D013866), CHOL (-), Ca (MESH:D002118)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090], Danio rerio (leopard danio, species) [taxon 7955]
- **Mutations:** rs16823802, Rs4074536

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12869559/full.md

## References

106 references — full list in the complete paper: https://tomesphere.com/paper/PMC12869559/full.md

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Source: https://tomesphere.com/paper/PMC12869559