# WDR72 Is Required for Urinary Acidification and Normal H+‐ATPase Activity in Intercalated Cells in Mice

**Authors:** Hannah Auwerx, Moana Busch‐Dohr, Xiaoxu Li, Carsten A. Wagner, Soline Bourgeois

PMC · DOI: 10.1111/apha.70165 · Acta Physiologica (Oxford, England) · 2026-02-04

## TL;DR

This study shows that the WDR72 protein is essential for kidney cells to properly acidify urine, and its absence leads to acid balance issues, especially in female mice.

## Contribution

The study identifies WDR72 as a key regulator of H+‐ATPase activity in kidney intercalated cells and reveals a sex-specific role in acid-base homeostasis.

## Key findings

- WDR72 is highly expressed in intercalated cells and localized at the apical membrane of type A-intercalated cells.
- Wdr72−/− mice show impaired urinary acidification and reduced H+‐ATPase activity, with sex-specific differences in acid handling.
- Loss of WDR72 leads to dysregulated H+‐ATPase subunit expression without affecting their localization.

## Abstract

Biallelic inactivating WDR72 variants are linked to distal renal tubular acidosis (dRTA), nephrocalcinosis, and amelogenesis imperfecta. The kidney shows high WDR72 expression; its precise localization and function remain unclear. WDR72 is a member of the WD40 repeat domain protein family—a large group of scaffold proteins involved in various pathways, including vesicular trafficking—which has been suggested as a potential role for WDR72. This study investigates WDR72 expression and its role in renal acid–base homeostasis.

We analyzed WDR72/Wdr72 expression in single‐cell transcriptome data from human and murine kidneys. We characterized Wdr72

−/−
 female and male mice and assessed Wdr72 mRNA and protein localization, the ability of the kidney to excrete acid, and the expression and function of the H+‐ATPase.

Transcriptome data showed that WDR72/Wdr72 is highly expressed in intercalated cells and other nephron segments. Immunohistochemistry localized WDR72 mostly at the apical membrane of type A‐intercalated cells (A‐IC). Wdr72

−/−
 mice exhibited alkaline urine under normal conditions, but only female knockout mice developed a pronounced metabolic acidosis upon dietary acid loading. Western blot analyses revealed sex‐dependent WDR72 expression changes with acid loading. Expression of several H+‐ATPase subunits was dysregulated in Wdr72

−/−
 kidneys while their localization in intercalated cells remained intact. Lower expression of H+‐ATPase subunits was paralleled by reduced H+‐ATPase activity observed in isolated microperfused collecting ducts.

These findings identify WDR72 as a critical regulator of type A‐intercalated cell dependent urinary acidification, modulating H+‐ATPase activity. The sex‐specific metabolic phenotype reveals a novel mechanism underlying sex differences in renal acid handling.

## Linked entities

- **Genes:** WDR72 (WD repeat domain 72) [NCBI Gene 256764], WDR72 (WD repeat domain 72) [NCBI Gene 256764]
- **Proteins:** LOC543149 (plasma membrane ATPase-like)
- **Diseases:** distal renal tubular acidosis (MONDO:0015827), nephrocalcinosis (MONDO:0001567), amelogenesis imperfecta (MONDO:0019507)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** ATP6V0A4 (ATPase H+ transporting V0 subunit a4) [NCBI Gene 50617] {aka A4, ATP6N1B, ATP6N2, DRTA3, RDRTA2, RTA1C}, Slc4a1 (solute carrier family 4 (anion exchanger), member 1) [NCBI Gene 20533] {aka Ae1, CD233, Empb3, l11Jus51}, Slc34a1 (solute carrier family 34 (sodium phosphate), member 1) [NCBI Gene 20505] {aka NaPi-IIa, Npt2, Npt2a, Slc17a2}, UMOD (uromodulin) [NCBI Gene 7369] {aka ADMCKD2, ADTKD1, FJHN, HNFJ, HNFJ1, MCKD2}, WDR72 (WD repeat domain 72) [NCBI Gene 256764] {aka AI2A3}, Vcam1 (vascular cell adhesion molecule 1) [NCBI Gene 22329] {aka CD106, Vcam-1}, ATP6V1B1 (ATPase H+ transporting V1 subunit B1) [NCBI Gene 525] {aka ATP6B1, DRTA2, RTA1B, VATB, VMA2, VPP3}, Slc26a4 (solute carrier family 26, member 4) [NCBI Gene 23985] {aka Pds, pendrin}, Aqp2 (aquaporin 2) [NCBI Gene 11827] {aka AQP-CD, WCH-CD, cph, jpk}, Dmxl2 (Dmx-like 2) [NCBI Gene 235380] {aka 6330586A12, 6430411K14Rik, E130119P06Rik, mKIAA0856}, Umod (uromodulin) [NCBI Gene 22242] {aka THP, Urehd1, urehr4}, WDR7 (WD repeat domain 7) [NCBI Gene 23335] {aka TRAG}, Slc4a4 (solute carrier family 4 (anion exchanger), member 4) [NCBI Gene 54403] {aka NBC, NBC1}, Pck1 (phosphoenolpyruvate carboxykinase 1, cytosolic) [NCBI Gene 18534] {aka PEPCK, PEPCK-C, Pck-1}, Dmxl1 (Dmx-like 1) [NCBI Gene 240283] {aka C630007L23Rik, D030030C22}, Slc9a3 (solute carrier family 9 (sodium/hydrogen exchanger), member 3) [NCBI Gene 105243] {aka 9030624O13Rik, NHE-3, NHE3}, Kcnj15 (potassium inwardly-rectifying channel, subfamily J, member 15) [NCBI Gene 16516] {aka 4930414N08Rik, IRKK, Kir4.2}, Slc12a1 (solute carrier family 12, member 1) [NCBI Gene 20495] {aka D630042G03Rik, Nkcc2, mBSC1, mNKCC2, urehr3}, Wdr72 (WD repeat domain 72) [NCBI Gene 546144] {aka D230040E23}, Atp6v1b1 (ATPase, H+ transporting, lysosomal V1 subunit B1) [NCBI Gene 110935] {aka Atp6b1, D630003L15, D630030L16Rik, D630039P21Rik, Vpp-3, Vpp3}, Rhcg (Rhesus blood group-associated C glycoprotein) [NCBI Gene 56315], Wdr7 (WD repeat domain 7) [NCBI Gene 104082] {aka TRAG, mKIAA0541}
- **Diseases:** renal (MESH:D006030), functional impairment of kidneys (MESH:D007674), renal calcifications (MESH:C565478), dRTA (MESH:D000141), nephrocalcinosis (MESH:D009397), CCDs (MESH:D002292), CKD (MESH:D051436), amelogenesis imperfecta (MESH:D000567), disorder of enamel development (MESH:D002658), CCD (MESH:D020512), Metabolic Acidosis (MESH:D000138), kidney stones (MESH:D007669)
- **Chemicals:** BCECF-AM (MESH:C057433), water (MESH:D014867), NaCl (MESH:D012965), isoflurane (MESH:D007530), HEPES (MESH:D006531), aldehyde (MESH:D000447), H+ (MESH:D006859), luminal (MESH:D010634), Xylazin (MESH:D014991), gluconate (MESH:C030691), polyacrylamide (MESH:C016679), hematoxylin (MESH:D006416), DTT (MESH:D004229), PBS (MESH:D007854), mineral oil (MESH:D008899), sucrose (MESH:D013395), proton (MESH:D011522), polyvinylidene fluoride (MESH:C024865), acid (MESH:D000143), urea (MESH:D014508), ethanol (MESH:D000431), K+ (MESH:D011188), NH4Cl (MESH:D000643), CaCl2 (MESH:D002122), paraformaldehyde (MESH:C003043), mannitol (MESH:D008353), Tween (MESH:D011136), phosphate (MESH:D010710), ammonia (MESH:D000641), xylene (MESH:D014992), HCO3 - (MESH:D001639), propane (MESH:D011407), Na+ (MESH:D012964), nigericin (MESH:D009550), creatinine (MESH:D003404), Alizarin Staining (-), Cl- (MESH:D002713), 4',6-diamidino-2-phenylindole (MESH:C007293), KOH (MESH:C029943), ammonium (MESH:D064751), HCl (MESH:D006851), heparin (MESH:D006493), SDS (MESH:D012967), Alizarin Red (MESH:C010078), Calcium (MESH:D002118)
- **Species:** Homo sapiens (human, species) [taxon 9606], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Mus musculus (house mouse, species) [taxon 10090], Cavia porcellus (domestic guinea pig, species) [taxon 10141]
- **Cell lines:** FIB — Mus musculus (Mouse), Hybridoma (CVCL_XA78), ENDO — Homo sapiens (Human), Transformed cell line (CVCL_E711)

## Full text

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## Figures

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## References

51 references — full list in the complete paper: https://tomesphere.com/paper/PMC12869471/full.md

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Source: https://tomesphere.com/paper/PMC12869471