# A Patient‐Derived Organoid Biobank of Adamantinomatous Craniopharyngioma as a Platform for Drug Discovery

**Authors:** Huarong Zhang, Chaohu Wang, Jun Fan, Zexin Chen, Haoying Yu, Yawen Bai, Tingcheng Zhang, Qianchao Zhu, Yiwen Feng, Peirong Niu, Jiaqian Chen, Liping Yang, Xueying Li, Lei Yu, Songtao Qi, Yi Liu

PMC · DOI: 10.1002/advs.202503924 · Advanced Science · 2025-11-18

## TL;DR

Researchers created a biobank of organoids from ACP tumors to study drug responses and found that Ceritinib may inhibit tumor growth.

## Contribution

A large-scale biobank of ACP patient-derived organoids with high success rate and drug screening capabilities is established.

## Key findings

- ACP patient-derived organoids accurately reflect the histology and genetics of original tumors.
- Ceritinib shows potent anti-tumor activity in ACP organoids by inhibiting a key signaling pathway.
- Clinical cases suggest caution in using Ceritinib due to initial tumor growth before therapeutic effects.

## Abstract

Adamantinomatous craniopharyngioma (ACP), a benign yet clinically challenging neoplasm situated in sellar‐suprasellar region, frequently causes hypothalamic dysfunction. Despite the identification of molecular alterations in ACP, the absence of robust research models has impeded the advancement of targeted therapies. Herein, the development of a large‐scale ACP biobank comprising 54 patient‐derived organoids (PDOs) is presented, achieves with a notable 90% success rate. Comprehensive characterization using hematoxylin and eosin (H&E) staining, immunofluorescence staining, and whole‐exome sequencing (WES) demonstrates that PDOs faithfully recapitulate key histoarchitectural features, molecular marker expression profiles, and somatic mutational landscapes of corresponding parental tumors. Drug sensitivity screening reveals diverse responses of PDOs to the drugs tested, with Ceritinib exhibiting potent and consistent anti‐tumor activity across seventeen PDOs evaluated. Further mechanistic investigations utilizing RNA transcriptomic sequencing have elucidated that Ceritinib inhibits PDO growth by downregulating the IGF‐1R/PI3K/AKT/GSK‐3β/β‐catenin signaling axis. Additionally, a retrospective analysis of two Ceritinib‐treated clinical cases reveals tumor growth with treatment before any possible therapeutic effects are observed, highlighting the need for caution and careful monitoring in treating ACP patients. Collectively, these findings demonstrate that ACP PDOs effectively preserve the biological characteristics of original tumors, thereby providing a valuable platform for developing precision therapies for ACP patients.

This study successfully establishes adamantinomatous craniopharyngioma (ACP) patient‐derived organoids (PDOs) that preserve the histopathological and genetic features of the original tumors. Through drug sensitivity assays and subsequent mechanistic analyses, the study demonstrates that Ceritinib exerts its inhibitory effects on ACP PDO growth by downregulating the IGF‐1R/PI3K/AKT/GSK‐3β/β‐catenin axis. Concurrently, clinical case studies provide preliminary, hypothesis‐generating evidence suggesting that Ceritinib may have therapeutic potential against ACP.

## Linked entities

- **Proteins:** IGF1R (insulin like growth factor 1 receptor), PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), AKT1 (AKT serine/threonine kinase 1), GSK3B (glycogen synthase kinase 3 beta), ctnnb1.S (catenin beta 1 S homeolog)
- **Chemicals:** Ceritinib (PubChem CID 57379345)
- **Diseases:** Adamantinomatous craniopharyngioma (MONDO:0002787), hypothalamic dysfunction (MONDO:0043101)

## Full-text entities

- **Genes:** AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, IGF1R (insulin like growth factor 1 receptor) [NCBI Gene 3480] {aka CD221, IGFIR, IGFR, JTK13}, GSK3B (glycogen synthase kinase 3 beta) [NCBI Gene 2932], PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}
- **Diseases:** hypothalamic dysfunction (MESH:D007027), ACP (MESH:D003397), neoplasm (MESH:D009369)
- **Chemicals:** Ceritinib (MESH:C586847)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12866856/full.md

## References

93 references — full list in the complete paper: https://tomesphere.com/paper/PMC12866856/full.md

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Source: https://tomesphere.com/paper/PMC12866856