# Formation of Condition‐Dependent Alpha‐Synuclein Fibril Strain in Artificial Cerebrospinal Fluid

**Authors:** Rūta Sniečkutė, Darius Šulskis, Arūnė Jocytė, Urtė Venclovaitė, Rimgailė Tamulytė, Mantas Žiaunys, Vytautas Smirnovas, Andrius Sakalauskas

PMC · DOI: 10.1002/advs.202505228 · Advanced Science · 2025-11-20

## TL;DR

This study shows that artificial cerebrospinal fluid influences the formation and stability of alpha-synuclein fibrils, which are linked to Parkinson's and MSA.

## Contribution

The study identifies a condition-dependent alpha-synuclein fibril strain in artificial cerebrospinal fluid with a structure seen in patient samples.

## Key findings

- Alpha-synuclein fibrils formed in aCSF have a unique electron density pocket with polar basic amino acids.
- These fibrils are unstable outside aCSF, showing the importance of extracellular environment in aggregation.
- The observed structure matches those found in Parkinson's and MSA patient aggregates.

## Abstract

α‐Synuclein (aSyn) is an intrinsically disordered protein involved in neurotransmission and synaptic plasticity. The pathological aggregation of this protein is a hallmark of synucleinopathies such as Parkinson's disease (PD) or Multiple System Atrophy (MSA). Misfolded aSyn, which primarily originates in the cell cytosol, transmits between neurons, promoting a prion‐like propagation. However, extracellular environments such as interstitial and cerebrospinal fluids (ISF & CSF) play a major role in its clearance and pathological transformation. The molecular components of CSF, including proteins, glycosaminoglycans, and metal ions, may influence the aggregate morphology, structure, and cytotoxicity to cells. To better understand how extracellular composition affects aggregates and their formation, artificial cerebrospinal fluid (aCSF) is employed to mimic potential aggregation processes occurring in CSF. Distinct aSyn fibrils are observed that exhibited low stability outside aCSF, and the removal of key CSF components led to its structural alterations. Cryo‐electron microscopy revealed that these fibrils possess an electron density pocket coordinated with polar basic AAs (K43, K45, H50) that is also observed in aggregates obtained from PD and MSA patients. The findings illustrate the importance of physiologically relevant conditions in studying aSyn aggregation and may explain why disease‐related fibril structure replication in vitro has not yet been successful.

α‐synuclein aggregation in artificial cerebrospinal fluid (aCSF) leads to a distinct conformation with an electron density pocket motif found in aggregates from PD and MSA patients. Such fibrils has low stability outside the reaction conditions, hinting about the influence of cerebrospinal fluid components not only on the formation, but also on the stability of α‐synuclein aggregates.

## Linked entities

- **Diseases:** Parkinson's disease (MONDO:0005180), Multiple System Atrophy (MONDO:0007803)

## Full-text entities

- **Genes:** CSF2 (colony stimulating factor 2) [NCBI Gene 1437] {aka CSF, GMCSF}, SNCA (synuclein alpha) [NCBI Gene 6622] {aka NACP, PARK1, PARK4, PD1}
- **Diseases:** PD (MESH:D010300), cytotoxicity (MESH:D064420), synucleinopathies (MESH:D000080874), MSA (MESH:D019578)
- **Chemicals:** glycosaminoglycans (MESH:D006025), metal (MESH:D008670), Artificial Cerebrospinal Fluid (-)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12866731/full.md

## References

95 references — full list in the complete paper: https://tomesphere.com/paper/PMC12866731/full.md

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Source: https://tomesphere.com/paper/PMC12866731