# Assembly and Functional Coordination of Two Families of Metabolic Organelles in Salmonella

**Authors:** Ping Chang, Mengru Yang, Yu Chen, Tianpei Li, Marie Held, Lu‐Ning Liu

PMC · DOI: 10.1111/1751-7915.70301 · Microbial Biotechnology · 2026-02-03

## TL;DR

Scientists studied how two types of metabolic compartments in Salmonella can coexist and interact, revealing how they form hybrid structures with unique properties.

## Contribution

The study reveals how hybrid bacterial microcompartments form through shell protein exchange while maintaining cargo specificity.

## Key findings

- Hybrid BMCs form via shell protein exchange between Pdu BMCs and α-carboxysomes.
- Cargo proteins remain segregated, showing encapsulation specificity.
- Hybrid BMCs exhibit altered mobility and enzymatic activity.

## Abstract

Bacterial microcompartments (BMCs) are protein‐based organelles that spatially organise metabolic pathways in prokaryotes, playing critical roles in enhancing metabolic processes and microbe fitness. Notably, many bacterial species possess multiple types of BMCs. While recent studies have advanced our knowledge about the assembly and function of individual BMC types, the mechanisms governing the coexistence and interplay of distinct BMC families within a single bacterial cell remain poorly understood. Here, we engineered 
Salmonella enterica
 serovar Typhimurium LT2 to co‐express native 1,2‐propanediol utilisation (Pdu) BMCs and synthetic α‐carboxysomes (α‐CBs), providing a unique platform for dissecting their assembly dynamics and functional crosstalk. By exploiting super‐resolution fluorescence imaging, electron microscopy, biochemical and enzymatic assays, our studies demonstrate the formation of hybrid BMCs through the exchange of shell proteins between Pdu BMCs and α‐CBs, whereas cargo proteins exhibit only limited compatibility, highlighting the specificity of encapsulation mechanisms. Furthermore, the generated hybrid BMCs display altered mobility and enzymatic activities, revealing emergent properties arising from shell protein interchangeability. Our findings provide insights into the inherent structural plasticity and modular architecture of BMCs. More broadly, this study has implications for deciphering how bacterial cells modulate the construction and functions of diverse metabolic modules within a single cellular context and could inform the rational design and engineering of synthetic organelles and bio‐factories with tailored metabolic functions for biotechnological applications.

Engineered 
Salmonella enterica
 co‐expressing native metabolosomes and synthetic carboxysomes formed hybrid bacterial microcompartments (BMCs) through shell protein exchange while maintaining cargo segregation, revealing the principles of BMC coexistence and modular assembly. Advanced understanding of in vivo BMC formation will inform the rational design of multifunctional organelles for metabolic engineering.

## Linked entities

- **Species:** Salmonella enterica (taxon 28901)

## Full-text entities

- **Genes:** pduD (propanediol utilization dehydratase, medium subunit) [NCBI Gene 1253562], pduC (propanediol utilization dehydratase, large subunit) [NCBI Gene 1253561], pduT (propanediol utilization protein) [NCBI Gene 1253575], pduK (propanediol utilization protein) [NCBI Gene 1253567], pduE (propanediol utilization dehydratase, small subunit) [NCBI Gene 1253563], lysozyme [NCBI Gene 1254135], MinD [NCBI Gene 1253334], pduA (propanediol utilization protein) [NCBI Gene 1253559], pduN (propanediol utilization protein) [NCBI Gene 1253570]
- **Diseases:** WT (MESH:D006969), gastrointestinal tract infections (MESH:D005770)
- **Chemicals:** arabinose (MESH:D001089), IPTG (MESH:D007544), nitrogen (MESH:D009584), SDS (MESH:D012967), ampicillin (MESH:D000667), anhydrotetracycline (MESH:C016229), vitamin B12 (MESH:D014805), 1,2-propanediol (MESH:D019946), Kanamycin (MESH:D007612), glucose (MESH:D005947), formic acid (MESH:C030544), HCl (MESH:D006851), MgSO4 (MESH:D008278), adenosylcobalamin (MESH:C000913), MgCl2 (MESH:D015636), RuBP (MESH:C001933), BP570 (-), chloramphenicol (MESH:D002701), m-toluate (MESH:C009503), ethanol (MESH:D000431), NaHCO3 (MESH:D017693), EDTA (MESH:D004492), gentamicin (MESH:D005839), paraformaldehyde (MESH:C003043), Carbon (MESH:D002244), sucrose (MESH:D013395), propionaldehyde (MESH:C005556), ATP (MESH:D000255), succinate (MESH:D019802), uranyl acetate (MESH:C005460), PVDF (MESH:C024865), 14C (MESH:C000615234), 2-mercaptoethanol (MESH:D008623), PBS (MESH:D007854), agar (MESH:D000362), CO2 (MESH:D002245), oligonucleotides (MESH:D009841), NADH (MESH:D009243), KCl (MESH:D011189), LP (MESH:D008070), water (MESH:D014867), sodium chloride (MESH:D012965), His (MESH:D006639), HEPES (MESH:D006531), Coomassie Brilliant Blue (MESH:C004692)
- **Species:** Salmonella (genus) [taxon 590], Enterobacterales (order) [taxon 91347], Salmonella enterica (species) [taxon 28901], Synechococcus elongatus PCC 7942 = FACHB-805 (strain) [taxon 1140], Halothiobacillus neapolitanus (species) [taxon 927], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371], Escherichia coli (E. coli, species) [taxon 562], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Haliangium ochraceum (species) [taxon 80816], Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain) [taxon 99287], Homo sapiens (human, species) [taxon 9606], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Corynebacterium glutamicum (species) [taxon 1718]
- **Mutations:** Y01135X
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), ATCC — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), Pdu — Rattus norvegicus (Rat), Adenocarcinoma of the rat prostate, Cancer cell line (CVCL_3569), LT2 — Homo sapiens (Human), Lung lymphangioleiomyomatosis, Finite cell line (CVCL_8891), BMCs-1 — Mus musculus (Mouse), Hybridoma (CVCL_C7RB), BMC-1 — Mus musculus (Mouse), Transformed cell line (CVCL_2I36), DH5alpha — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12866334/full.md

## References

80 references — full list in the complete paper: https://tomesphere.com/paper/PMC12866334/full.md

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Source: https://tomesphere.com/paper/PMC12866334