# Identification of RPGRIP1L as an instability-maintaining gene to drive tumor growth and PD-L1 expression via Hedgehog signaling in breast cancer

**Authors:** Meng Lv, Yan’e Liu, Weihong Cao, Yongmei Wang, Qi Wang, Xueqiang Gao, Baowei Peng, Haibo Wang, Yan Mao

PMC · DOI: 10.1186/s12885-025-15500-2 · BMC Cancer · 2025-12-30

## TL;DR

This study identifies RPGRIP1L as a key gene that promotes genomic instability and tumor growth in breast cancer by activating the Hedgehog signaling pathway and increasing PD-L1 expression.

## Contribution

The study reveals RPGRIP1L as a novel instability-maintaining gene in breast cancer linked to Hedgehog signaling and immune checkpoint expression.

## Key findings

- RPGRIP1L is significantly upregulated in breast cancer and correlates with poor patient prognosis.
- Knocking down RPGRIP1L reduces genomic instability and tumor growth in mouse models.
- RPGRIP1L activates the Hedgehog pathway, driving tumor proliferation and PD-L1 expression.

## Abstract

Genomic instability is a hallmark of nearly all human cancers, yet the genetic regulators that govern this instability, their functional roles, and their therapeutic potential remain incompletely understood in breast cancer. In this study, we conducted a comprehensive analysis of the expression profiles of genomic instability-maintaining genes (GIMGs) in breast cancer and revealed that elevated expression of GIMGs was associated with adverse clinical outcomes and an altered tumor immune microenvironment. Through further analysis, we identified a core set of GIMGs and pinpointed RPGRIP1L as a critical driver of genomic instability in breast cancer. Notably, RPGRIP1L expression was significantly upregulated in breast cancer tissues and strongly correlated with poor patient prognosis. Functional studies demonstrated that RPGRIP1L knockdown reduced genomic instability in tumor cells, as evidenced by decreased Phosphorylated Histone H2AX (γH2AX) expression, and suppressed tumor growth in mouse models. Additionally, high RPGRIP1L expression was linked to elevated expression of immune checkpoint Programmed Death Ligand 1(PD-L1) in human breast cancer samples. Mechanistically, we found that RPGRIP1L promoted the activation of the Hedgehog signaling pathway, which in turn drived tumor proliferation and upregulated PD-L1 expression. Collectively, these findings highlight RPGRIP1L as a key genomic instability-maintaining gene in human breast cancer, offering critical insights into the molecular mechanisms underlying disease progression. Furthermore, targeting RPGRIP1L may represent a promising therapeutic strategy for breast cancer.

The online version contains supplementary material available at 10.1186/s12885-025-15500-2.

## Linked entities

- **Genes:** RPGRIP1L (RPGRIP1 like) [NCBI Gene 23322], H2AXA (Histone superfamily protein) [NCBI Gene 837409], CD274 (CD274 molecule) [NCBI Gene 29126]
- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Genes:** CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, H2AX (H2A.X variant histone) [NCBI Gene 3014] {aka H2A.X, H2A/X, H2AFX}, RPGRIP1L (RPGRIP1 like) [NCBI Gene 23322] {aka COACH3, CORS3, FTM, JBTS7, MKS5, NPHP8}
- **Diseases:** cancers (MESH:D009369), breast cancer (MESH:D001943)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12866045/full.md

## References

1 references — full list in the complete paper: https://tomesphere.com/paper/PMC12866045/full.md

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Source: https://tomesphere.com/paper/PMC12866045