# The Influence of Innate Immunity, Adaptive Immunity and Diet on Intestinal Microbiota Following Trichuris muris Infection

**Authors:** Bridgious Walusimbi, Kelly S. Hayes, Melissa A. E. Lawson, Seona Thompson, Allison J. Bancroft, Alison M. Elliott, Richard K. Grencis

PMC · DOI: 10.1111/pim.70060 · Parasite Immunology · 2026-02-02

## TL;DR

This study shows how diet and immune system interact to affect gut microbes and resistance to a parasitic worm infection in mice.

## Contribution

The study reveals diet can influence parasite clearance through immune-independent, microbiota-mediated pathways.

## Key findings

- High-fat diet reduced worm burden in mice lacking adaptive immunity.
- Diet altered gut microbiota composition, enriching Bacteroides and Parabacteroides.
- Immune status and diet jointly determine susceptibility to helminth infection.

## Abstract

Trichuris trichiura infects nearly 500 million people worldwide, causing intestinal inflammation, malnutrition, and growth impairment, particularly in children from low‐resource settings. While host immunity is central to parasite clearance, diet and the gut microbiota may also modulate infection. Using the Trichuris muris model, we examined how immune competence and diet interact to influence worm burden, antibody responses, and gut microbiota composition. Wild‐type (WT), RAG1‐deficient (lacking adaptive immunity), and RAG1/γc‐deficient (lacking both adaptive and innate lymphoid immunity) mice were fed either a normal diet (ND) or high‐fat diet (HFD) and infected with a low dose of T. muris. WT mice on ND developed chronic infection with strong IgG2a/c responses, consistent with Th1‐biased immunity. In contrast, WT mice on HFD achieved near‐complete parasite clearance, accompanied by elevated IgG1 and reduced IgG2a/c titres, indicating diet‐induced Th2 bias. In RAG1‐ and RAG1/γc‐deficient mice, infection persisted under a normal diet but worm burdens were partially reduced on HFD, indicating that diet enhances parasite control through immune‐independent, possibly microbiota‐mediated pathways. Microbiota clustered by genotype and diet, with HFD‐associated enrichment of Bacteroides, Parabacteroides, and Blautia. These findings demonstrate that diet and immune status jointly shape helminth susceptibility through coordinated effects on host immunity and the gut microbiota.

## Linked entities

- **Genes:** RAG1 (recombination activating 1) [NCBI Gene 5896], GC (GC vitamin D binding protein) [NCBI Gene 2638]
- **Diseases:** malnutrition (MONDO:0006873)
- **Species:** Trichuris muris (taxon 70415), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** LOC105243590 (Ig heavy chain Mem5-like) [NCBI Gene 105243590] {aka IgH, Igg1}, Il33 (interleukin 33) [NCBI Gene 77125] {aka 9230117N10Rik, Il-33, Il1f11, NF-HEV}, Rag1 (recombination activating 1) [NCBI Gene 19373] {aka Rag-1}, Ighg1 (immunoglobulin heavy constant gamma 1 (G1m marker)) [NCBI Gene 16017] {aka IgG1, Igh-4, VH7183}, Il2rg (interleukin 2 receptor, gamma chain) [NCBI Gene 16186] {aka CD132, [g]c, gamma(c), gc, p64}, Cd4 (CD4 antigen) [NCBI Gene 12504] {aka L3T4, Ly-4}, Cblif (cobalamin binding intrinsic factor) [NCBI Gene 14603] {aka Gif, IF, INF}, Il1rl1 (interleukin 1 receptor-like 1) [NCBI Gene 17082] {aka DER4, Fit-1, Ly84, ST2L, St2, St2-rs1}
- **Diseases:** Immune (MESH:D007154), dysbiosis (MESH:D064806), malnutrition (MESH:D044342), intestinal helminths (MESH:D007410), ND (MESH:C537354), Parasitic helminths (MESH:D010272), chronic (MESH:D002908), inflammation (MESH:D007249), metabolic dysfunction (MESH:D008659), RAG1-deficient (MESH:D007153), HFD (MESH:D004620), Trichuris muris  Infection (MESH:D014257), lymphocyte (MESH:D007945), anaemia (MESH:D000743), immune impairment (MESH:D020274), WT (MESH:D006969), Infection (MESH:D007239), Chronic infection (MESH:D000088562), worm (MESH:D017189), neglected tropical diseases (MESH:D058069), type-2 (MESH:D003924), growth impairment (MESH:D006130)
- **Chemicals:** carbohydrate (MESH:D002241), glycan (MESH:D011134), nucleotide (MESH:D009711), bile acid (MESH:D001647), cholesterol (MESH:D002784), amino acid (MESH:D000596), fatty acid (MESH:D005227), lipid (MESH:D008055), butyrate (MESH:D002087), 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (MESH:C002502), fat (MESH:D005223), SCFA (MESH:D005232), Butanoate (-)
- **Species:** Intestinimonas (genus) [taxon 1392389], Erysipelatoclostridium [taxon 1505663], Mus musculus (house mouse, species) [taxon 10090], Parabacteroides (genus) [taxon 375288], Desulfovibrio (genus) [taxon 872], Escherichia coli (E. coli, species) [taxon 562], Anaerotruncus (genus) [taxon 244127], Lactobacillus (genus) [taxon 1578], Lactococcus lactis (species) [taxon 1358], gut metagenome (species) [taxon 749906], Faecalibacterium prausnitzii (species) [taxon 853], Faecalibaculum (genus) [taxon 1729679], Parasutterella (genus) [taxon 577310], Trichuris muris (species) [taxon 70415], Muribaculum (genus) [taxon 1918540], Bacteroides (genus) [taxon 816], Homo sapiens (human, species) [taxon 9606], Ruminococcus (genus) [taxon 1263], Trichuris trichiura (human whipworm, species) [taxon 36087], Bilophila (genus) [taxon 35832], Shigella (genus) [taxon 620], Helicobacter (genus) [taxon 209], Eubacterium xylanophilum (species) [taxon 39497], Akkermansia (genus) [taxon 239934], Alloprevotella (genus) [taxon 1283313], Candidatus Gastranaerophilales (order) [taxon 1906119], Romboutsia (genus) [taxon 1501226], Eubacterium coprostanoligenes (species) [taxon 290054], Blautia (genus) [taxon 572511], Alistipes (genus) [taxon 239759]
- **Mutations:** C -23 C

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12865144/full.md

## References

57 references — full list in the complete paper: https://tomesphere.com/paper/PMC12865144/full.md

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Source: https://tomesphere.com/paper/PMC12865144