# Genetic Features of the Scuticociliate Pathogen Philaster sp. Isolate FWC2 That Causes Sea Urchin Mass Mortality

**Authors:** Shen Jean Lim, Mya Breitbart

PMC · DOI: 10.1111/jeu.70065 · The Journal of Eukaryotic Microbiology · 2026-02-02

## TL;DR

This paper studies a scuticociliate pathogen causing sea urchin deaths and reports genetic features of the organism.

## Contribution

The study provides new genetic data on a scuticociliate pathogen linked to sea urchin mass mortality.

## Key findings

- The haploid genome size of Philaster sp. isolate FWC2 is estimated at 122–136 Mbp.
- A 41,396 bp mitochondrial genome with 24 protein-coding genes was assembled.
- A β-PKA protein homolog potentially involved in host infection was identified.

## Abstract

A scuticociliate most closely related to Philaster apodigitiformis caused mass mortalities of diadematoid sea urchins and was cultured as Philaster sp. isolate FWC2. We sequenced the metagenomic content of this isolate, which was predicted to represent ≤ 56% of the complete genome. Based on k‐mer counts, the haploid genome size was predicted to be 122–136 Mbp. We assembled and annotated a 4,088 bp nuclear ribosomal operon, a 41,396 bp mitochondrial genome with 19.22% G + C content, 24 protein‐coding genes, 6 tRNA genes, and 2 rRNA genes, and a protein sequence homologous to β‐PKA in Philaster apodigitiformis potentially involved in host infection.

## Linked entities

- **Species:** Philaster sp. (taxon 1634377), Philaster apodigitiformis (taxon 1198315)

## Full-text entities

- **Diseases:** infection (MESH:D007239)
- **Chemicals:** SRX31190122 (-), silver nitrate (MESH:D012835)
- **Species:** Oryza sativa (Asian cultivated rice, species) [taxon 4530], Diadema antillarum (species) [taxon 105358], Philaster apodigitiformis (species) [taxon 1198315], Paracentrotus lividus (common sea urchin, species) [taxon 7656], Pseudocohnilembus persalinus (species) [taxon 266149], Philaster sp. (species) [taxon 1634377], Miamiensis avidus (species) [taxon 279580], Uronema marinum (species) [taxon 35107], Echinoidea (sea urchin, class) [taxon 7625], Paramecium aurelia (species) [taxon 5889], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Alveolata (alveolates, clade) [taxon 33630], Philaster sinensis (species) [taxon 1507326], Poecilia reticulata (guppy, species) [taxon 8081], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** UUC for phenylalanine
- **Cell lines:** FLO — Homo sapiens (Human), Barrett adenocarcinoma, Cancer cell line (CVCL_2045), MIN114 — Homo sapiens (Human), Transformed cell line (CVCL_E777), FWC2 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_A628)

## Full text

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## Figures

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## References

48 references — full list in the complete paper: https://tomesphere.com/paper/PMC12865139/full.md

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Source: https://tomesphere.com/paper/PMC12865139