# A multi-ancestry meta genome-wide association study of migraine among veterans: associations with traumatic brain injury, depression, and post-traumatic stress disorder

**Authors:** Marianna Gasperi, Sara Brin Rosenthal, Adam X. Maihofer, Armand Gerstenberger, Daniel Dochtermann, Hélène Choquet, Alice Pressman, Matthew S. Panizzon, Murray B. Stein, Nathaniel M. Schuster, Saiju Pyarajan, Niloofar Afari, Caroline M. Nievergelt

PMC · DOI: 10.1038/s41380-025-03392-4 · Molecular psychiatry · 2026-02-03

## TL;DR

This study identifies new genetic loci linked to migraine in Veterans and finds no causal genetic links to psychiatric conditions like PTSD and depression.

## Contribution

The study identifies 36 novel migraine-associated loci in Veterans and explores sex-specific genetic effects and drug targets.

## Key findings

- 49 genome-wide significant loci were identified, including 36 novel ones.
- 283 genes, such as MAML3 and TLR4, were newly associated with migraine.
- Mendelian randomization found no causal links between migraine and psychiatric disorders.

## Abstract

Migraine is a neurovascular disorder that poses a high burden to Veterans, who face a greater risk than sex-matched individuals in the general population. Genetic research on migraine in Veterans and its link to psychiatric comorbidities is limited. We present a meta-analysis of a genome-wide association study (GWAS) of migraine in a predominantly male sample of over 433,000 Veterans, including 87,859 cases, from the Million Veteran Program (MVP), identifying 49 genome-wide significant loci, with 36 novel to this study, of which 7 replicated in an independent prior GWAS (after Bonferroni correction for number of loci tested). Our analyses revealed 283 genes, including some newly associated with migraine: MAML3, CELF4, IRX1, ASXL1, SPOCD1, CXCL, and TLR4. In silico analyses showed enrichment in brain and uterine tissues, which may reflect broader hormonal or neuroendocrine pathways. Compared to previous migraine GWAS, our results show minimal vascular tissue enrichment, potentially reflecting the sample composition, which was predominantly men and Veterans. Migraine SNP-based heritability was 10% for men and 16% for women, and several sex-specific loci were identified through sex-stratified analyses. Despite high genetic correlations with neuropsychiatric disorders – including post-traumatic stress disorder, depression, and traumatic brain injury – Mendelian randomization analyses found no causal links. Finally, we prioritized potential migraine drug targets, including losmapimod (which reduces production of toxic DUX4 protein) and TLR4 antagonists.

## Linked entities

- **Genes:** MAML3 (mastermind like transcriptional coactivator 3) [NCBI Gene 55534], CELF4 (CUGBP Elav-like family member 4) [NCBI Gene 56853], IRX1 (iroquois homeobox 1) [NCBI Gene 79192], ASXL1 (ASXL transcriptional regulator 1) [NCBI Gene 171023], SPOCD1 (SPOC domain containing 1) [NCBI Gene 90853], TLR4 (toll like receptor 4) [NCBI Gene 7099]
- **Proteins:** DUX4 (double homeobox 4)
- **Chemicals:** losmapimod (PubChem CID 11552706)
- **Diseases:** migraine (MONDO:0005277), post-traumatic stress disorder (MONDO:0005146), depression (MONDO:0002050), traumatic brain injury (MONDO:0858950)

## Full-text entities

- **Genes:** DUX4 (double homeobox 4) [NCBI Gene 100288687] {aka DUX4L}, CELF4 (CUGBP Elav-like family member 4) [NCBI Gene 56853] {aka BRUNOL4, CELF-4}, MAML3 (mastermind like transcriptional coactivator 3) [NCBI Gene 55534] {aka CAGH3, ERDA3, GDN, MAM-2, MAM2, TNRC3}, SPOCD1 (SPOC domain containing 1) [NCBI Gene 90853] {aka PPP1R146}, ASXL1 (ASXL transcriptional regulator 1) [NCBI Gene 171023] {aka BOPS, MDS}, IRX1 (iroquois homeobox 1) [NCBI Gene 79192] {aka IRX-5, IRXA1}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}
- **Diseases:** Migraine (MESH:D008881), depression (MESH:D003866), post-traumatic stress disorder (MESH:D013313), neurovascular disorder (MESH:D013901), traumatic brain injury (MESH:D000070642), neuropsychiatric disorders (MESH:D001523)
- **Chemicals:** losmapimod (MESH:C543534)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12863721/full.md

## References

86 references — full list in the complete paper: https://tomesphere.com/paper/PMC12863721/full.md

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Source: https://tomesphere.com/paper/PMC12863721