# Viral zoonoses assessment in invasive rodent species from São Tomé and Príncipe

**Authors:** Tereza Almeida, Maria Carolina Matos, Daniel A. Velarde-Garcéz, Vanessa A. Mata, Marquinha Martins, Conceição Neves, Pedro Beja, Ana M. Lopes, Joana Abrantes, Pablo Colunga-Salas, Pablo Colunga-Salas, Pablo Colunga-Salas

PMC · DOI: 10.1371/journal.pone.0341657 · PLOS One · 2026-02-02

## TL;DR

This study screened invasive rodents in São Tomé and Príncipe for zoonotic viruses but found no evidence of five viral families, emphasizing the need for continued monitoring to prevent disease outbreaks.

## Contribution

The study provides the first viral zoonoses assessment in invasive rodents from São Tomé and Príncipe.

## Key findings

- No evidence of Arenaviridae, Coronaviridae, Flaviviridae, Hantaviridae, or Poxviridae was found in rodent samples.
- The study highlights the importance of ongoing surveillance for zoonotic viruses in rodent populations.
- The absence of detected viruses does not rule out their potential presence in the region.

## Abstract

Zoonoses are diseases transmitted from animals to humans, highlighting the inseparable link between animal and human health. They are responsible for approximately 2.4 billion cases of illness and 2.2 million deaths annually, posing a significant challenge to public health and food security. Transmission of infectious agents from animals to humans occurs through direct contact, ingestion, inhalation, or inoculation of the infectious agent. Finding practical ways to monitor the presence and/or abundance of zoonotic pathogens is important to estimate the risk of spillover to humans. Since rodents are present almost everywhere, live in proximity with humans and host several zoonotic viruses, we conducted a screening in different tissue samples of black rats (Rattus rattus) and brown rats (Rattus norvegicus) collected in São Tomé and Príncipe in 2021 and 2022 for the presence of five zoonotic families of viruses, including Arenaviridae, Coronaviridae, Flaviviridae, Hantaviridae, and Poxviridae. Although we found no evidence of the presence of these viral taxa among the rodent samples tested, our study does not exclude their presence in São Tomé and Príncipe. Continued monitoring of these and other zoonotic viruses is advisable to prevent or mitigate the emergence of viral diseases that are often fatal to humans.

## Linked entities

- **Species:** Rattus rattus (taxon 10117), Rattus norvegicus (taxon 10116)

## Full-text entities

- **Diseases:** plague (MESH:D010930), zoonotic (MESH:D015047), hantavirus pulmonary syndrome (MESH:D018804), deaths (MESH:D003643), Viral (MESH:D014777), Lassa fever (MESH:D007835), leptospirosis (MESH:D007922), dislocation (MESH:D004204), bacterial, helminthic, protozoan, and fungal infections (MESH:D009181), toxoplasmosis (MESH:D014123), infected (MESH:D007239), arenavirus infections (MESH:D001117), rabies (MESH:D011818), viremia (MESH:D014766), infectious diseases (MESH:D003141), hantavirus (MESH:D018778)
- **Chemicals:** isoflurane (MESH:D007530), 2x Green (-)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Viverridae (civets, family) [taxon 9673], Sus scrofa (pig, species) [taxon 9823], Dengue virus (no rank) [taxon 12637], Ebola virus [taxon 186536], LCMV [taxon 11623], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Tick-borne encephalitis virus (no rank) [taxon 11084], Lassa virus [taxon 11620], Arachis hypogaea (goober, species) [taxon 3818], Bagaza virus (no rank) [taxon 64290], Gammacoronavirus (genus) [taxon 694013], Rattus norvegicus (brown rat, species) [taxon 10116], Rattus (rat, genus) [taxon 10114], Arenavirus (genus) [taxon 11618], Cercopithecidae (monkey, family) [taxon 9527], Bos taurus (bovine, species) [taxon 9913], Malacomys longipes (big-eared swamp rat, species) [taxon 112226], Equus caballus (domestic horse, species) [taxon 9796], Leporipoxvirus (genus) [taxon 10270], Microtus arvalis (common vole, species) [taxon 47230], Rodentia (rodent, order) [taxon 9989], Hantaan virus [taxon 1980471], Cercopithecus mona (Mona monkey, species) [taxon 36226], Rotavirus (genus) [taxon 10912], Hantaviridae (family) [taxon 1980413], Cowpox virus (no rank) [taxon 10243], Flaviviridae (family) [taxon 11050], Myxoma virus (no rank) [taxon 10273], Crocidura fingui (species) [taxon 1658661], Homo sapiens (human, species) [taxon 9606], flavivirus [taxon 11051], Norovirus (genus) [taxon 142786], Orthohantavirus (genus) [taxon 1980442], Mastomys natalensis (African soft-furred rat, species) [taxon 10112], Civettictis civetta (African civet, species) [taxon 94186], Yellow fever virus (no rank) [taxon 11089], Dobrava virus [taxon 1980467], Puumala virus [taxon 1980486], Micaelamys namaquensis (Namaqua Micaelamys, species) [taxon 472707], Kobuvirus (genus) [taxon 194960], Felis catus (cat, species) [taxon 9685], Mustela nivalis (least weasel, species) [taxon 36239], Coronaviridae (family) [taxon 11118], Theobroma cacao (cacao, species) [taxon 3641], Canis lupus familiaris (dog, subspecies) [taxon 9615], Seoul virus [taxon 1980490], Middle East respiratory syndrome-related coronavirus (no rank) [taxon 1335626], Capra hircus (domestic goat, species) [taxon 9925], Mus triton (Gray-bellied mouse, species) [taxon 473865], Deomys ferrugineus (Congo forest mouse, species) [taxon 106343], Severe acute respiratory syndrome-related coronavirus (no rank) [taxon 694009], Rattus rattus (black rat, species) [taxon 10117]
- **Mutations:** N501Y

## Full text

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## Figures

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## References

50 references — full list in the complete paper: https://tomesphere.com/paper/PMC12863471/full.md

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Source: https://tomesphere.com/paper/PMC12863471