# RNA‐Based Therapies for Inherited Metabolic Disorders

**Authors:** Reddy Sreekanth Vootukuri, Sonam Gurung, Roopkatha Ghosh, Philippa B. Mills, Julien Baruteau, Haiyan Zhou

PMC · DOI: 10.1002/jimd.70150 · Journal of Inherited Metabolic Disease · 2026-02-01

## TL;DR

This review explores how RNA-based therapies offer new treatment options for inherited metabolic disorders by modulating gene expression and restoring protein function.

## Contribution

The paper provides a comprehensive overview of RNA therapy modalities and their delivery methods for treating inherited metabolic disorders.

## Key findings

- RNA-based therapies like AONs, siRNAs, and mRNA can modulate gene expression and restore protein function in IMDs.
- Delivery methods such as lipid nanoparticles and ligand conjugation are critical for the clinical application of RNA therapies.
- Recent successes in personalized RNA therapies for rare diseases highlight their potential to redefine patient-specific treatment approaches.

## Abstract

Inherited metabolic disorders (IMDs) are a diverse and complex group of genetic conditions resulting from deficiencies in enzymes, transporters, or cofactors. These deficiencies lead to metabolic dysfunction and severe clinical consequences. Despite significant progress in understanding their molecular basis, treatment options remain limited for many IMDs. RNA‐based therapies including antisense oligonucleotides (AONs), small interfering RNAs (siRNAs), and messenger RNA (mRNA) therapeutics have emerged as promising treatment strategies for modulating gene expression, silencing pathogenic transcripts, and restoring deficient proteins, offering new avenues for disease intervention. In this review, we summarise the chemistry and mechanisms of action of different RNA therapy modalities including splice‐modulating and gene silencing AONs, siRNAs, and mRNA therapies. The delivery of these RNA‐based therapies remains a significant challenge. Here, we outline the development of various delivery methods, including lipid nanoparticle (LNP) packaging, ligand conjugation, and tissue‐specific delivery systems as well as their clinical applications in treating IMDs. We also summarise the clinical application of RNA therapies in rare diseases, an area that has grown rapidly in the last few years, as exemplified by the success of some n‐of‐1 therapies for IMDs, which have redefined personalised medicine by enabling rapid, patient‐specific drug development. As RNA‐based therapeutics continue to evolve, their clinical applications in IMDs will require continued innovation in novel chemistries, advanced delivery technologies, and streamlined regulatory frameworks to unlock their full potential.

## Full-text entities

- **Genes:** SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, PARN (poly(A)-specific ribonuclease) [NCBI Gene 5073] {aka DAN, DKCB6, PFBMFT4}, MMUT (methylmalonyl-CoA mutase) [NCBI Gene 4594] {aka MCM, MUT}, CRYGD (crystallin gamma D) [NCBI Gene 1421] {aka CACA, CCA3, CCP, CRYG4, CTRCT4, PCC}, DMD (dystrophin) [NCBI Gene 1756] {aka BMD, CMD3B, DXS142, DXS164, DXS206, DXS230}, GYS1 (glycogen synthase 1) [NCBI Gene 2997] {aka GSY, GYS}, APOB (apolipoprotein B) [NCBI Gene 338] {aka FCHL2, FLDB, LDLCQ4, apoB-100, apoB-48}, ATHS (atherosclerosis susceptibility (lipoprotein associated)) [NCBI Gene 470] {aka ALP}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, SMN2 (survival of motor neuron 2, centromeric) [NCBI Gene 6607] {aka BCD541, C-BCD541, GEMIN1, SMNC, TDRD16B}, UGCG (UDP-glucose ceramide glucosyltransferase) [NCBI Gene 7357] {aka GCS, GLCT1}, EIF4E (eukaryotic translation initiation factor 4E) [NCBI Gene 1977] {aka AUTS19, CBP, EIF4E1, EIF4EL1, EIF4F, eIF-4E}, TTR (transthyretin) [NCBI Gene 7276] {aka AMYLD1, ATTR, CTS, CTS1, HEL111, HsT2651}, XRN1 (5'-3' exoribonuclease 1) [NCBI Gene 54464] {aka SEP1}, DCP2 (decapping mRNA 2) [NCBI Gene 167227] {aka NUDT20}, Asl (argininosuccinate lyase) [NCBI Gene 109900] {aka 2510006M18Rik, ASAL}, Hmbs (hydroxymethylbilane synthase) [NCBI Gene 15288] {aka PBGD, Ups, Uros1}, RNASEH1 (ribonuclease H1) [NCBI Gene 246243] {aka H1RNA, PEOB2, RNH1}, LDLR (low density lipoprotein receptor) [NCBI Gene 3949] {aka LDLCQ2}, GYS2 (glycogen synthase 2) [NCBI Gene 2998], Pccb (propionyl Coenzyme A carboxylase, beta polypeptide) [NCBI Gene 66904] {aka 1300012P06Rik}, MMD (monocyte to macrophage differentiation associated) [NCBI Gene 23531] {aka MMA, MMD1, PAQR11}, EXOSC10 (exosome component 10) [NCBI Gene 5394] {aka PM-Scl, PM/Scl-100, PMSCL, PMSCL2, RRP6, Rrp6p}, APOE (apolipoprotein E) [NCBI Gene 348] {aka AD2, APO-E, ApoE4, LDLCQ5, LPG}, PCSK9 (proprotein convertase subtilisin/kexin type 9) [NCBI Gene 255738] {aka FH3, FHCL3, HCHOLA3, LDLCQ1, NARC-1, NARC1}, AGO2 (argonaute RISC catalytic component 2) [NCBI Gene 27161] {aka CASC7, EIF2C2, LESKRES, LINC00980, PPD, Q10}, ALAS1 (5'-aminolevulinate synthase 1) [NCBI Gene 211] {aka ALAS, ALAS-H, ALAS3, ALASH, MIG4}, TFRC (transferrin receptor) [NCBI Gene 7037] {aka CD71, IMD46, T9, TFR, TFR1, TR}, G6PC1 (glucose-6-phosphatase catalytic subunit 1) [NCBI Gene 2538] {aka G6PC, G6PT, G6Pase, GSD1, GSD1a}, MFSD8 (major facilitator superfamily domain containing 8) [NCBI Gene 256471] {aka CCMD, CLN7, SLC74A1}, A4GALT (alpha 1,4-galactosyltransferase (P1PK blood group)) [NCBI Gene 53947] {aka A14GALT, A4GALT1, Gb3S, P(k), P1, P1PK}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, Pah (phenylalanine hydroxylase) [NCBI Gene 18478], ASGR1 (asialoglycoprotein receptor 1) [NCBI Gene 432] {aka ASGPR, ASGPR1, CLEC4H1, HL-1}, ADA (adenosine deaminase) [NCBI Gene 100] {aka ADA1}, DCP1B (decapping mRNA 1B) [NCBI Gene 196513] {aka DCP1}, SHMT2 (serine hydroxymethyltransferase 2) [NCBI Gene 6472] {aka GLYA, HEL-S-51e, NEDCASB, SHMT, mSHMT}, DIS3 (DIS3 exosome endoribonuclease and 3'-5' exoribonuclease) [NCBI Gene 22894] {aka 2810028N01Rik, EXOSC11, KIAA1008, RRP44, dis3p}, Pcca (propionyl-Coenzyme A carboxylase, alpha polypeptide) [NCBI Gene 110821]
- **Diseases:** hypercholesterolemia (MESH:D006937), cardiac and movement disorders (MESH:D006331), Parkinson's (MESH:D010300), DMD (MESH:D020388), X-linked adrenoleukodystrophy (MESH:D000326), amyloidosis (MESH:D000686), PA (MESH:D056693), arginase deficiency (MESH:D020162), hereditary tyrosinemia type I (MESH:D020176), UCDs (MESH:D056806), Metabolic Disorders (MESH:D008659), methylmalonic acidaemia (MESH:C537358), inflammation (MESH:D007249), AIP (MESH:D017118), leukodystrophy (MESH:D007966), nephrocalcinosis (MESH:D009397), pain (MESH:D010146), hereditary myopathy with lactic acidosis (MESH:C564972), methylmalonyl-CoA mutase (MUT) deficiency (MESH:C565390), Gaucher disease (MESH:D005776), AATD (MESH:D019896), SMA (MESH:D009134), IMDs (MESH:D020739), classical galactosemia (MESH:D005693), glycogen storage diseases (MESH:D006008), cardiovascular diseases (MESH:D002318), death (MESH:D003643), ASA (MESH:D056807), PKU (MESH:D010661), hATTR (MESH:C567782), Rare disease (MESH:D035583), OTC deficiency (MESH:D020163), VP (MESH:D046350), hepatic deficiency of a haeme biosynthesis enzyme (MESH:D056486), vitamin B6 metabolism disorders (MESH:D026681), non-alcoholic fatty liver (MESH:D065626), organic acidurias (MESH:D000092124), citrin deficiency (MESH:C538053), VLCAD (MESH:C536353), acute pancreatitis (MESH:D010195), AT (MESH:D001260), PFIC III (MESH:C535933), COVID-19 (MESH:D000086382), nitrogen wasting (MESH:D007222), genetic defect (MESH:D030342), enzyme deficiencies (MESH:D008661), toxicity (MESH:D064420), carbamoyl phosphate synthetase 1 deficiency (MESH:D020165), developmental delay (MESH:D002658), haemophilia B (MESH:D002836), neurotoxic (MESH:D020258), Fabry disease (MESH:D000795), chronic-transporter deficiencies (MESH:C536778), motor impairment (MESH:D000068079), familial intrahepatic cholestasis III (MESH:C535932), autosomal dominant IMD (MESH:C566739), lysosomal storage disorders (MESH:D016464), OTCD (MESH:D015799), organ failure (MESH:D009102), infectious diseases (MESH:D003141)
- **Chemicals:** morpholinos (MESH:D060172), Mipomersen (MESH:C524142), adenine (MESH:D000225), glycosphingolipid (MESH:D006028), cholesterol (MESH:D002784), Nusinersen (MESH:C000590926), LNA (MESH:C477371), m6A (MESH:C005955), Psi (MESH:D011560), givosiran (MESH:C000630124), phospholipids (MESH:D010743), oligonucleotide (MESH:D009841), ALA (MESH:D000622), Eteplirsen (MESH:C000611335), golodirsen (MESH:C000710673), ribose (MESH:D012266), 5-methylcytosine (MESH:D044503), oxygen (MESH:D010100), nucleosides (MESH:D009705), poly (A) (MESH:D011061), glycogen (MESH:D006003), porphyrin (MESH:D011166), Nm (MESH:D008466), peptide (MESH:D010455), urea nitrogen (MESH:C530477), inotersen (MESH:C000629536), galactose (MESH:D005690), iron (MESH:D007501), viltolarsen (MESH:C000654848), 5'-vinylphosphonate (-), AON (MESH:D016376), 3-methylcytosine (MESH:C036386), PEG (MESH:D011092), casimersen (MESH:C000718147), N-acetyl galactosamine (MESH:D000116), n- (MESH:D009584), glutathione (MESH:D005978), Lipid (MESH:D008055), vitamin B12 (MESH:D014805), PBG (MESH:D011162)
- **Species:** Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Homo sapiens (human, species) [taxon 9606], Rous sarcoma virus (no rank) [taxon 11886], Mus musculus (house mouse, species) [taxon 10090], Caenorhabditis elegans (species) [taxon 6239], Rattus norvegicus (brown rat, species) [taxon 10116]
- **Mutations:** G715V, A to I, c.648G>T
- **Cell lines:** MCK- — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_B1PX)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12861719/full.md

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12861719/full.md

## References

222 references — full list in the complete paper: https://tomesphere.com/paper/PMC12861719/full.md

---
Source: https://tomesphere.com/paper/PMC12861719