# Single-cell analysis identifies BASP1 as a driver of drug resistance and cell plasticity in oral squamous cell carcinoma

**Authors:** Abinash Behera, Sudeshna Datta, Sibasish Mohanty, Pallavi Mohapatra, Shamima Azma Ansari, Sreeparna Podder, Rachna Rath, Dillip Kumar Muduly, Rajeeb K. Swain, Sunil K. Raghav, Rupesh Dash

PMC · DOI: 10.1016/j.jbc.2025.111126 · The Journal of Biological Chemistry · 2026-01-06

## TL;DR

This study finds that a protein called BASP1 helps cancer cells resist chemotherapy and change their traits, making it a potential target for treating oral cancer.

## Contribution

The study identifies BASP1 as a novel driver of drug resistance and cell plasticity in oral squamous cell carcinoma.

## Key findings

- BASP1 is upregulated in drug-resistant and transitional cell clusters in oral cancer.
- BASP1 knockdown reverses EMT and restores chemotherapy sensitivity in resistant cells.
- BASP1 regulates LIN7A and β-catenin-mediated EMT through phosphorylation and microRNA suppression.

## Abstract

Despite initial positive responses with chemotherapy, many cancer patients experience relapse, continued tumor growth, and metastatic spread due to drug resistance. It is well documented that a rare population of phenotypically heterogeneous cells contributes to intratumour heterogeneity and drug resistance. To date, these rare populations are poorly characterized. To identify the potential role of these rare populations in drug resistance, here we have performed single-cell RNA sequencing of human oral squamous cell carcinomas lines presenting with sensitive, early, and late cisplatin-resistance patterns. The single-cell RNA-sequencing data identified two different transitional clusters within the three, sensitive, early, and late cisplatin-resistant major clusters. The differential gene expression profile and deregulated pathways analysis suggested Brain Abundant Membrane-Attached Signal Protein 1 (BASP1) as a major upregulated gene not only in major drug-resistant clusters but also in transitional clusters. Selective knockdown of BASP1 reverses epithelial to mesenchymal transition (EMT) phenotype in cisplatin-resistant cells and restores cisplatin-induced cell death. Mechanistically, BASP1 positively regulates LIN7A expression through phosphorylation of RAC-alpha serine/threonine-protein kinase as well as by supressing microRNA hsa-mir-501-3p, which in turn induces β-catenin-mediated EMT in chemoresistant cells. Overall, our study demonstrates that BASP1 acts as a key regulator of EMT in cisplatin-resistant oral squamous cell carcinoma and represents a promising therapeutic target to overcome drug resistance in advanced stages of the disease.

## Linked entities

- **Genes:** BASP1 (brain abundant membrane attached signal protein 1) [NCBI Gene 10409], LIN7A (lin-7 cell polarity scaffold A) [NCBI Gene 8825], ctnnb1.S (catenin beta 1 S homeolog) [NCBI Gene 380441]
- **Chemicals:** cisplatin (PubChem CID 5460033)
- **Diseases:** oral squamous cell carcinoma (MONDO:0004958)

## Full-text entities

- **Genes:** BASP1 (brain abundant membrane attached signal protein 1) [NCBI Gene 10409] {aka CAP-23, CAP23, NAP-22, NAP22}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, LIN7A (lin-7 cell polarity scaffold A) [NCBI Gene 8825] {aka LIN-7A, LIN7, MALS-1, MALS1, TIP-33, VELI1}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}
- **Diseases:** cancer (MESH:D009369), oral squamous cell carcinoma (MESH:D000077195)
- **Chemicals:** cisplatin (MESH:D002945)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12860937/full.md

## References

47 references — full list in the complete paper: https://tomesphere.com/paper/PMC12860937/full.md

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Source: https://tomesphere.com/paper/PMC12860937