# Metabolic Signatures of Acinetobacter baumannii and Klebsiella pneumoniae Infections in Acute-on-chronic Liver Failure

**Authors:** Camilla Cadoli, Sania Arif, Wibke Ballhorn, Angela Brieger, Maximilian Joseph Brol, Florence Castelli, Hans-Peter Erasmus, Julia Fischer, Robert Gurke, Lisa Hahnefeld, Christophe Junot, Nico Kraus, Cristina Ortiz, Robert Schierwagen, Sara Garcia Torres, Frank Erhard Uschner, Volker Müller, Jonel Trebicka, Christoph Welsch, Volkhard A.J. Kempf

PMC · DOI: 10.1016/j.jcmgh.2025.101707 · Cellular and Molecular Gastroenterology and Hepatology · 2025-12-12

## TL;DR

This study identifies specific metabolic changes caused by bacterial infections in patients with acute-on-chronic liver failure, which could help in early diagnosis and treatment.

## Contribution

The study reveals distinct infection-related metabolic signatures in ACLF and links them to hepatotoxicity and clinical outcomes.

## Key findings

- Distinct metabolic signatures were identified for Acinetobacter baumannii and Klebsiella pneumoniae infections.
- Four key metabolites from each bacterial species showed hepatotoxic effects in liver cells.
- Elevated levels of specific metabolites were confirmed in patient sera with ACLF and acute decompensation.

## Abstract

Acute-on-chronic liver failure (ACLF) is a life-threatening syndrome of acute hepatic decompensation (AD) that leads to multiorgan failure and high mortality. Bacterial infections are often implicated in ACLF pathogenesis; however, their underlying molecular mechanisms remain poorly understood. This study employed a combined in vitro-ex vivo metabolomics approach to investigate infection-associated metabolic alterations relevant to ACLF.

Gut (Caco-2) cells were infected with Acinetobacter baumannii and Klebsiella pneumoniae strains. Metabolite profiling was conducted on cell culture supernatants, and selected metabolites were tested for hepatotoxicity in vitro using liver (HepG2) cells. Metabolomic analysis of sera from 2 independent patient cohorts (AD and ACLF) was conducted to validate in vitro findings and to assess their clinical relevance.

Distinct metabolic signatures were identified in Abaumannii (19 metabolites) and Kpneumoniae (15 metabolites)-infected Caco-2 cells. Four key metabolites from each bacterial species were prioritized for further experiments: α-ketoglutarate, indoleacetic acid, p-coumaric acid, uridine (Abaumannii), desthiobiotin, N8-acetylspermidine, N-acetylglutamine, and β-pinene (Kpneumoniae). Hepatotoxicity was demonstrated in liver (HepG2) cells exposed to Caco-2 infected cell-derived supernatants, infection-associated metabolites, and metabolite mixtures (in all conditions, P < .0001). Increased levels of α-ketoglutarate (P = .0002), N-acetylglutamine (P = .0153), indoleacetic acid (P < .05), and N8-acetylspermidine (P < .01) have been confirmed in the sera of patients with AD and ACLF.

Our findings suggest that metabolites associated with bacterial infections and hepatotoxic potential are significantly elevated in patients with AD and ACLF. These compounds may contribute to disease-related metabolic disturbances, representing promising candidates as early diagnostic biomarkers and targeted therapeutic strategies for ACLF.

## Linked entities

- **Chemicals:** indoleacetic acid (PubChem CID 802), p-coumaric acid (PubChem CID 637542), uridine (PubChem CID 6029), desthiobiotin (PubChem CID 445027), N8-acetylspermidine (PubChem CID 123689), N-acetylglutamine (PubChem CID 182230), β-pinene (PubChem CID 440967)
- **Species:** Acinetobacter baumannii (taxon 470), Klebsiella pneumoniae (taxon 573), Homo sapiens (taxon 9606)

## Full-text entities

- **Diseases:** infection (MESH:D007239), ACLF (MESH:D065290), Klebsiella pneumoniae Infections (MESH:D007710), multiorgan failure (MESH:D051437), Bacterial infections (MESH:D001424), AD (MESH:D017114)
- **Chemicals:** p-coumaric acid (MESH:C495469), N-acetylglutamine (MESH:C032007), alpha-ketoglutarate (MESH:D007656), uridine (MESH:D014529), beta-pinene (MESH:C010789), N8-acetylspermidine (-), desthiobiotin (MESH:C004749), indoleacetic acid (MESH:C030737)
- **Species:** Klebsiella pneumoniae (species) [taxon 573], Acinetobacter baumannii (species) [taxon 470], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12860731/full.md

## References

48 references — full list in the complete paper: https://tomesphere.com/paper/PMC12860731/full.md

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Source: https://tomesphere.com/paper/PMC12860731