# Gut microbiota metabolites positively impacts chemotherapy effects in colorectal cancer

**Authors:** Sara Gomes, Sara Granja, Luana A. Osório, Ruth E. Mackay, Fátima Baltazar, Elisabete Silva, Ana Preto

PMC · DOI: 10.1007/s10565-026-10147-6 · 2026-01-24

## TL;DR

This study shows that gut microbiota metabolites can boost the effectiveness of chemotherapy in colorectal cancer.

## Contribution

The first report demonstrating that physiologically relevant SCFA combinations improve 5-FU chemotherapy in CRC.

## Key findings

- SCFAs enhance the antitumor effects of low-dose 5-FU in CRC cell models.
- Combined SCFA and 5-FU treatment significantly reduces tumor size in the CAM assay.
- SCFAs inhibit CRC cell growth, proliferation, survival, and migration.

## Abstract

Colorectal cancer (CRC) remains one of the leading causes of cancer-related deaths worldwide, largely due to late-stage diagnosis and limited efficacy of current therapies. 5-Fluorouracil (5-FU) is the standard chemotherapeutic agent used in CRC treatment; however, its effectiveness is often hampered by resistance, toxicity, and suboptimal outcomes in advanced-stage tumors. Recent evidence suggests that gut microbiota-derived short-chain fatty acids (SCFAs) exert anticancer effects and may hold promise as therapeutic adjuvants. In this study, we investigated the potential of a physiologically relevant mixture of SCFAs to enhance the efficacy of 5-FU against CRC. Using a combination of 2D monolayer cultures, 3D models, and the in vivo chicken chorioallantoic membrane (CAM) assay, we demonstrated that SCFAs positively affect the antitumor effects of low-dose 5-FU. SCFAs contributed to the inhibition of CRC cell growth, proliferation, survival, and migration, with an overall increase of the anti-tumour effects observed across the different models. The combined treatment led to a significant reduction in tumour size in the CAM assay, contributing for an improvement of the effects of 5-FU alone. To our knowledge, this is the first report showing that physiologically relevant SCFA combinations can be harnessed to improve the therapeutic index of 5-FU in CRC, in a context-dependent manner. These findings support the development of microbiota-targeted co-adjuvant strategies to optimize CRC chemotherapy, reduce treatment toxicity, and improve patient outcomes, which is important given the clinical interest in microbiome-chemotherapy interactions.

The online version contains supplementary material available at 10.1007/s10565-026-10147-6.

## Linked entities

- **Chemicals:** 5-Fluorouracil (PubChem CID 3385)
- **Diseases:** colorectal cancer (MONDO:0005575), CRC (MONDO:0005575)
- **Species:** Gallus gallus (taxon 9031)

## Full-text entities

- **Genes:** RNASE1 (ribonuclease A family member 1, pancreatic) [NCBI Gene 6035] {aka RAC1, RIB1, RNS1}, Tyms (thymidylate synthase) [NCBI Gene 22171] {aka Ts}, PDLIM7 (PDZ and LIM domain 7) [NCBI Gene 9260] {aka LMP1, LMP3}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, CTSD (cathepsin D) [NCBI Gene 1509] {aka CLN10, CPSD, HEL-S-130P}, TYMS (thymidylate synthetase) [NCBI Gene 7298] {aka DKCD, HST422, TMS, TS}, VIM (vimentin) [NCBI Gene 7431], PDCD1 (programmed cell death 1) [NCBI Gene 5133] {aka ADMIO4, AIMTBS, CD279, PD-1, PD1, SLEB2}, KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845] {aka 'C-K-RAS, C-K-RAS, CFC2, K-RAS2A, K-RAS2B, K-RAS4A}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673] {aka B-RAF1, B-raf, BRAF-1, BRAF1, NS7, RAFB1}, SNAI1 (snail family transcriptional repressor 1) [NCBI Gene 6615] {aka SLUGH2, SNA, SNAH, SNAIL, SNAIL1, dJ710H13.1}, SLC7A11 (solute carrier family 7 member 11) [NCBI Gene 23657] {aka CCBR1, xCT}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}
- **Diseases:** rectal cancers (MESH:D012004), constipation (MESH:D003248), gastrointestinal diseases (MESH:D005767), hematologic malignancies (MESH:D019337), metastases (MESH:D009362), diarrhea (MESH:D003967), inflammation (MESH:D007249), pain (MESH:D010146), necrosis (MESH:D009336), CRC (MESH:D015179), age-related macular degeneration (MESH:D008268), loss of appetite (MESH:D001068), glioblastoma (MESH:D005909), obesity (MESH:D009765), colonic carcinoma (MESH:D003110), Clostridium difficile infection (MESH:D003015), cytotoxic (MESH:D064420), inflammatory bowel diseases (MESH:D015212), adenocarcinoma (MESH:D000230), fatigue (MESH:D005221), tumorigenic (MESH:D002471), invasive (MESH:D009361), RKO tumours (MESH:D009369), CAM (MESH:D015433)
- **Chemicals:** acetic acid (MESH:D019342), regorafenib (MESH:C559147), oxygen (MESH:D010100), DMSO (MESH:D004121), ethanol (MESH:D000431), PI (MESH:D011419), streptomycin (MESH:D013307), acetate (MESH:D000085), penicillin (MESH:D010406), pyrimidine (MESH:C030986), paraformaldehyde (MESH:C003043), prebiotics (MESH:D056692), PU (MESH:D011140), cetuximab (MESH:D000068818), 5-FU (MESH:D005472), water (MESH:D014867), irinotecan (MESH:D000077146), crystal violet (MESH:D005840), SRB (MESH:C022027), CO2 (MESH:D002245), DAB (MESH:C000469), PBS (MESH:D007854), Propionate (MESH:D011422), nivolumab (MESH:D000077594), DAPI (MESH:C007293), methanol (MESH:D000432), sodium propionate (MESH:C514135), oxaliplatin (MESH:D000077150), pembrolizumab (MESH:C582435), glutaraldehyde (MESH:D005976), bevacizumab (MESH:D000068258), Butyrate (MESH:D002087), ramucirumab (MESH:C543333), capecitabine (MESH:D000069287), citrate (MESH:D019343), Sodium acetate (MESH:D019346), salinomycin (MESH:C010327), sodium citrate (MESH:D000077559), panitumumab (MESH:D000077544), SCFA (MESH:D005232), sodium butyrate (MESH:D020148), kaempferol (MESH:C006552), glutamine (MESH:D005973), thymine nucleotide (MESH:D013942), fludarabine (MESH:C024352), phalloidin (MESH:D010590), -chain fatty acids (-)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606], Gallus gallus (bantam, species) [taxon 9031]
- **Mutations:** G13D, V600E, G12D
- **Cell lines:** HCT-15 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0292), CAM — Homo sapiens (Human), Finite cell line (CVCL_WB24), RKO — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0504), COLO-205 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0218), line — Mus musculus (Mouse), Adenoma of the mouse pulmonary system, Cancer cell line (CVCL_5V03), NCM460 — Homo sapiens (Human), Spontaneously immortalized cell line (CVCL_0460), SW480 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0546)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12855361/full.md

---
Source: https://tomesphere.com/paper/PMC12855361