# Aberrant skeletal muscle morphogenesis and myofiber differentiation characterize equine myotonic dystrophy

**Authors:** Stephanie J. Valberg, Zoë J. Williams, Elizabeth G. Ames, James R. Mickelson, Yvette S. Nout-Lomas, Gabriele Landolt, Macarena Sanz, Keri Gardner

PMC · DOI: 10.1371/journal.pone.0341655 · 2026-01-29

## TL;DR

Equine myotonic dystrophy (eMD) is a muscle disorder in horses with unique molecular causes that differ from human myotonic dystrophy, affecting muscle development and function.

## Contribution

The study identifies distinct molecular mechanisms in eMD that impact muscle morphogenesis and gene regulation, differing from human DM1 and DM2.

## Key findings

- eMD muscle shows upregulated genes and proteins related to muscle morphogenesis and embryonic myosin expression.
- Trinucleotide and tetranucleotide repeat expansions in DMPK and CNBP, common in human DM, were not found in eMD.
- CLCN1 fetal exon 7 was present in equal frequency in eMD and control muscles, and ATP2A1 exon 22 splicing was not altered.

## Abstract

Equine myotonic dystrophy (eMD) is a rare neuromuscular disorder of undetermined origin marked by muscle hypertrophy and stiffness, dystrophic muscle histopathology, and myotonic discharges. In humans, myotonic dystrophy (DM) arises from trinucleotide repeat expansions in dystrophia myotonica protein kinase (DMPK) (DM1) or tetranucleotide expansions in cellular nucleic acid-binding protein (CNBP) (DM2), which disrupt mRNA processing and induce embryonic splicing patterns across multiple genes. In 6 eMD Quarter Horse types, (2–36 months-of-age) and 8 control Quarter Horses we determined: (1) fiber type composition of triceps, gluteal, and semimembranosus muscles; (2) differential gene (DEG) and protein (DEP) expression using transcriptomic and proteomic analyses; (3) presence of repeat expansions in transcripts of DMPK or CNBP and (4) exon 7 retention in CLCN1 or exon 22 splicing in ATP2A1. Predominance and clustering of type 1 fibers, expression of embryonic myosin, and upregulated mitochondrial and sarcomeric DEPs characterized eMD hindlimb musculature. Gene ontology (GO) analysis of 730 upregulated DEGs identified numerous GO terms related to morphogenesis of mesoderm-derived tissues and upregulated genes impacting myoD expression in eMD muscle. Top upregulated DEG involved myogenesis (MYOZ2, SBK2, SBK3, PAMR1), neurons, transcription/translation, cytoskeleton, basement/plasma membranes, and calcium binding/transport. Top upregulated proteins also impacted muscle morphogenesis (MUSTN1, CSRP3, TMSBX4, PDLIM, CALD1) as well as categories of mitochondria, sarcomere, extracellular matrix/ basement membrane, transcription, translation, cell cycle regulation, neurons amongst others. Downregulated DEP primarily impacted mitochondria, the sarcomere and glycogen metabolism. Notably, unlike human myotonic dystrophy, trinucleotide repeat expansions were not found in the DMPK 3’UTR (CTG)n nor tetranucleotide repeat expansions (CCTG)n in intron 1 of CNBP. Isoforms of CLCN1 containing fetal exon 7 were detected in equal frequency in eMD and control muscle and exon 22 was not alternatively spliced in ATP2A1 as has been found in DM1. Thus, distinct from DM1 and DM2, eMD is driven by unique molecular mechanisms impacting skeletal muscle morphogenesis, neurons and regulation of gene transcription/translation that alter fiber type composition, distribution and morphology. The origin of myotonia does not appear to be driven by a mutation in CLCN1 or retention of exon CLCN 7. Expanded splice site analysis and further research is warranted to elucidate the cause of myotonia and the distinct etiology of eMD.

## Linked entities

- **Genes:** DMPK (DM1 protein kinase) [NCBI Gene 1760], CNBP (CCHC-type zinc finger nucleic acid binding protein) [NCBI Gene 7555], CLCN1 (chloride voltage-gated channel 1) [NCBI Gene 1180], ATP2A1 (ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1) [NCBI Gene 487], MYOZ2 (myozenin 2) [NCBI Gene 51778], SBK2 (SH3 domain binding kinase family member 2) [NCBI Gene 646643], SBK3 (SH3 domain binding kinase family member 3) [NCBI Gene 100130827], PAMR1 (peptidase domain containing associated with muscle regeneration 1) [NCBI Gene 25891], MUSTN1 (musculoskeletal, embryonic nuclear protein 1) [NCBI Gene 389125], CSRP3 (cysteine and glycine rich protein 3) [NCBI Gene 8048], CALD1 (caldesmon 1) [NCBI Gene 800]
- **Diseases:** myotonic dystrophy (MONDO:0016107)

## Full-text entities

- **Genes:** DDN [NCBI Gene 100058896], NOTCH2 [NCBI Gene 100067078], APOH [NCBI Gene 100063250], MYH2 [NCBI Gene 791236], CELF1 (CUGBP Elav-like family member 1) [NCBI Gene 10658] {aka BRUNOL2, CUG-BP, CUGBP, CUGBP1, EDEN-BP, NAB50}, KIF6 [NCBI Gene 100147665], PKP2 [NCBI Gene 100070065], SMYD1 [NCBI Gene 100052805], DMPK (DM1 protein kinase) [NCBI Gene 1760] {aka DM, DM1, DM1PK, DMK, MDPK, MT-PK}, MYL2 [NCBI Gene 100147688], FHL1 [NCBI Gene 100056943], Myf5 [NCBI Gene 100060703], CLCN1 [NCBI Gene 100050692], musculoskeletal embryonic nuclear protein 1 [NCBI Gene 100059872], myogenin [NCBI Gene 100146744], SOX-9 [NCBI Gene 100033908], CNBP (CCHC-type zinc finger nucleic acid binding protein) [NCBI Gene 7555] {aka CNBP1, DM2, PROMM, RNF163, ZCCHC22, ZNF9}, FGFR1 [NCBI Gene 100057614], MYH1 [NCBI Gene 791235], SBK2 [NCBI Gene 100147098], SLC25A13 [NCBI Gene 100063046], WT1 [NCBI Gene 100072704], TGFBR3 [NCBI Gene 100060435], CNTNAP4 [NCBI Gene 100055462], ATP2A1 [NCBI Gene 100064403], desmin [NCBI Gene 100059397], MYH8 [NCBI Gene 100062893], TNNT2 [NCBI Gene 100146343], PAMR1 [NCBI Gene 100067176], GLI3 [NCBI Gene 100064098], WNT5A [NCBI Gene 100059157], MYH3 (myosin heavy chain 3) [NCBI Gene 4621] {aka CPSFS1A, CPSFS1B, CPSKF1A, CPSKF1B, DA2A, DA2B}, CLCN1 (chloride voltage-gated channel 1) [NCBI Gene 1180] {aka CLC1}, DMPK [NCBI Gene 100146609], TMSB4X [NCBI Gene 100034015], MYH3 [NCBI Gene 100063003], HMGA1 [NCBI Gene 100629238], CNBP [NCBI Gene 100050146], MYL6B [NCBI Gene 100059367], PVALB [NCBI Gene 100069554], LAMB2 [NCBI Gene 100053539], BRDT [NCBI Gene 100051647], MYOZ2 [NCBI Gene 100063994], UNC5CL [NCBI Gene 100066002], CALD1 [NCBI Gene 100068106], histone H1.2 [NCBI Gene 100053307], LRIT3 [NCBI Gene 100072841], miR-24 [NCBI Gene 100315051], HIBADH [NCBI Gene 100054707], CLCN 7 [NCBI Gene 100067691], MBNL1 (muscleblind like splicing regulator 1) [NCBI Gene 4154] {aka EXP, MBNL}, MRF4 [NCBI Gene 100050603], ATP2A1 (ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1) [NCBI Gene 487] {aka ATP2A, SERCA1}, MYH7 [NCBI Gene 791234], EFNA3 [NCBI Gene 100057186], SCN4A [NCBI Gene 100049793], MECP2 [NCBI Gene 100058125], GLI2 [NCBI Gene 100067420], TGFB2 [NCBI Gene 100050377], ANP32B [NCBI Gene 100064179]
- **Diseases:** and biceps femoris muscles (MESH:D012021), acute necrosis (MESH:D015882), femoris (MESH:D060048), type 1 polysaccharide storage myopathy (MESH:C564877), stiff gait (MESH:D020234), angular atrophy (MESH:D065170), hyperkalemic periodic paralysis (MESH:D020513), deficiencies of vitamin E (MESH:D014811), hypoplasia cataracts (MESH:D002386), Myotonic discharges (MESH:D019522), neuromuscular disorder (MESH:D009468), muscle spasms (MESH:D013035), Epimysial fibrosis (MESH:D005355), Myotonia congenita (MESH:D009224), eMD1 (MESH:D020389), lethargy (MESH:D053609), anguloid atrophy (MESH:D001284), peripheral neuropathy (MESH:D010523), developmental disorder (MESH:D002658), myotonia (MESH:D009222), atrophy of the middle gluteal muscle (MESH:D009133), superficial (MESH:D006259), Muscle (MESH:D019042), weakness (MESH:D018908), muscle contractions (MESH:C536214), testicular atrophy (MESH:C567108), contractures (MESH:D003286), DM (MESH:D009223), Myotonic (MESH:D020967), muscle hypertrophy (MESH:C536106), hypertrophy (MESH:D006984), dystrophic (MESH:D020388), diarrhea (MESH:D003967), inflammatory (MESH:D007249)
- **Chemicals:** sodium dodecyl-sulfate (MESH:D012967), trifluoroacetic acid (MESH:D014269), nitrogen (MESH:D009584), valine (MESH:D014633), Alexa Fluor  488 (MESH:C000711379), calcium (MESH:D002118), lipid (MESH:D008055), agarose (MESH:D012685), bicinchoninic acid (MESH:C047117), Pacific Blue (-), purine (MESH:C030985), lactate (MESH:D019344), EDTA (MESH:D004492), glycogen (MESH:D006003), Tween-20 (MESH:D011136), FITC (MESH:D016650), methocarbamol (MESH:D008721), polyA (MESH:D011061), purine nucleotides (MESH:D011685), E (MESH:D004540), pentobarbital sodium (MESH:D010424), selenium (MESH:D012643), NADH (MESH:D009243), detomidine (MESH:C041255), saline (MESH:D012965), polysaccharide (MESH:D011134), vitamin E (MESH:D014810), flunixin meglumine (MESH:C014558)
- **Species:** Equus caballus (domestic horse, species) [taxon 9796], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]

## Figures

18 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12854428/full.md

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Source: https://tomesphere.com/paper/PMC12854428