# Gut bacteria presence in the brain is increased after ischemic stroke in mice

**Authors:** Alex Peh, Evany Dinakis, Michael Nakai, Rikeish R. Muralitharan, Samoda Rupasinghe, Jenny L. Wilson, Connie H.Y. Wong, Hamdi A. Jama, Charlotte M.O. Barker, Mahnaz Modarresi, Barbara K. Kemp-Harper, Tenghao Zheng, Francine Z. Marques, Brad R.S. Broughton

PMC · DOI: 10.1080/19490976.2026.2617694 · 2026-01-26

## TL;DR

This study shows that gut bacteria can move to the brain after a stroke in mice, which may worsen recovery.

## Contribution

The study demonstrates for the first time that gut bacteria translocate to the brain after stroke and affect motor function.

## Key findings

- Gut bacteria were found in the ischemic brain hemisphere of mice after stroke.
- Bacterial translocation was not observed in germ-free mice.
- Sympathetic nervous system activation promotes bacterial migration to the brain.

## Abstract

Systemic infections are a common cause of complications and death after stroke. These infections can occur due to the breakdown of the gut epithelial barrier and the translocation of bacteria from the gut to peripheral systemic tissues. However, it remains unclear whether gut bacteria also translocate to the brain and contribute to stroke-induced neuronal damage. In this study, we observed a significant number of peptidoglycan- and lipopolysaccharide-positive bacteria in the ischemic hemisphere of mice subjected to either photothrombotic (PT) stroke or middle cerebral artery occlusion (MCAO). In contrast, no bacteria were observed in the ischemic brains of germ-free mice following MCAO. Absolute quantification via PCR also revealed increased bacteria in the ischemic hemisphere and blood of PT mice. Bacterial translocation to the brain is associated with the breakdown of the gut-epithelial and blood–brain barriers. Although inhibition of sympathetic tone reduces gut–epithelial barrier permeability, the bacterial load in the brain and functional deficits poststroke, it does not affect cerebral apoptosis, neuroinflammation or infarct volume. Collectively, these findings indicate that activation of the sympathetic nervous system after stroke promotes the migration of gut-derived bacteria into the ischemic brain, and this process worsens motor function in mice.

## Linked entities

- **Diseases:** ischemic stroke (MONDO:1060198)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Mpo (myeloperoxidase) [NCBI Gene 17523] {aka mKIAA4033}, Ly6c1 (lymphocyte antigen 6 family member C1) [NCBI Gene 17067] {aka Ly-6C, Ly-6C1, Ly6c}, Iba1 (induction of brown adipocytes 1) [NCBI Gene 114737], Dnase1 (deoxyribonuclease I) [NCBI Gene 13419] {aka DNaseI, Dnl1}, Ocln (occludin) [NCBI Gene 18260] {aka Ocl}, Reg3b (regenerating islet-derived 3 beta) [NCBI Gene 18489] {aka HIP, PAP1, Pap, REG-III}, Tlr4 (toll-like receptor 4) [NCBI Gene 21898] {aka Lps, Ly87, Ran/M1, Rasl2-8}, Itgam (integrin alpha M) [NCBI Gene 16409] {aka CD11b/CD18, CR3, CR3A, Cd11b, F730045J24Rik, Ly-40}, Nod2 (nucleotide-binding oligomerization domain containing 2) [NCBI Gene 257632] {aka ACUG, BLAU, CD, Card15, F830032C23Rik, IBD1}, Casp3 (caspase 3) [NCBI Gene 12367] {aka A830040C14Rik, AC-3, CASP-3, CC3, CPP-32, CPP32}, Cldn1 (claudin 1) [NCBI Gene 12737], Tjp1 (tight junction protein 1) [NCBI Gene 21872] {aka ZO1}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Tjp2 (tight junction protein 2) [NCBI Gene 21873] {aka ZO-2}, Adgre1 (adhesion G protein-coupled receptor E1) [NCBI Gene 13733] {aka DD7A5-7, EGF-TM7, Emr1, F4/80, Gpf480, Ly71}, Nlrp3 (NLR family, pyrin domain containing 3) [NCBI Gene 216799] {aka AGTAVPRL, AII/AVP, Cias1, FCAS, FCU, MWS}, Ly6g (lymphocyte antigen 6 family member G) [NCBI Gene 546644] {aka Gr-1, Gr1, Ly-6G}, Ptprc (protein tyrosine phosphatase receptor type C) [NCBI Gene 19264] {aka B220, CD45R, Cd45, L-CA, Ly-5, Lyt-4}
- **Diseases:** urinary tract infections (MESH:D014552), dysphagia (MESH:D003680), fibrosis (MESH:D005355), neuronal damage (MESH:D009410), neurological sequelae (MESH:D009422), GI bleeding (MESH:D006471), neurological diseases (MESH:D020271), cerebral ischaemia (MESH:D002545), Stroke (MESH:D020521), Infection (MESH:D007239), hyperthyroidism (MESH:D006980), neuroinflammation (MESH:D000090862), Infarct (MESH:D007238), CNS injury (MESH:D002494), brain damage (MESH:D001925), Ischemic stroke (MESH:D002544), Bacterial infections (MESH:D001424), colorectal dysfunction (MESH:D015179), brain injury (MESH:D001930), Huntington's disease (MESH:D006816), apoptosis (MESH:D065703), brain infarct (MESH:D020520), gastrointestinal inflammation (MESH:D007249), ALS (MESH:D000690), pneumonia (MESH:D011014), lung infection (MESH:D012141), MCAO (MESH:D020244), muscle weakness (MESH:D018908), Alzheimer's disease (MESH:D000544), neuronal dysfunction (MESH:D009461), death (MESH:D003643), Brain edema (MESH:D001929)
- **Chemicals:** PBS (-), Propranolol (MESH:D011433), formalin (MESH:D005557), N (MESH:D009584), Periodic Acid (MESH:D010504), TRIzol (MESH:C411644), Alcian blue (MESH:D000423), OCT (MESH:C051883), DAPI (MESH:C007293), Evans blue (MESH:D005070), paraffin (MESH:D010232), water (MESH:D014867), LPS (MESH:D008070), isoflurane (MESH:D007530), SYBR Green (MESH:C098022), ethanol (MESH:D000431), paraformaldehyde (MESH:C003043), Rose Bengal (MESH:D012395), silicon (MESH:D012825), PAS (MESH:D011478)
- **Species:** Alistipes (genus) [taxon 239759], Chlamydia pneumoniae (species) [taxon 83558], Eubacterium xylanophilum (species) [taxon 39497], Proteus (genus) [taxon 210425], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Homo sapiens (human, species) [taxon 9606], Barnesiella sp. (species) [taxon 2033407], Parasutterella (genus) [taxon 577310], Bacillota (clostridial firmicutes, phylum) [taxon 1239], gut metagenome (species) [taxon 749906], Lachnoclostridium (genus) [taxon 1506553], Lactobacillus (genus) [taxon 1578], Enterococcus (genus) [taxon 1350], Bacteroidales bacterium (species) [taxon 2030927], Parabacteroides (genus) [taxon 375288], Mus musculus (house mouse, species) [taxon 10090], Pseudomonadota (proteobacteria, phylum) [taxon 1224]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12851396/full.md

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Source: https://tomesphere.com/paper/PMC12851396