# Impaired systemic antibody response against gut microbiota pathobionts in critical illness and susceptibility to nosocomial infections

**Authors:** Nicole A. Cho, Jared Schlechte, Ian-ling Yu, Ish Bains, Tanner Fahlman, Colin Mackenzie, Braedon McDonald

PMC · DOI: 10.1186/s40635-026-00860-1 · Intensive Care Medicine Experimental · 2026-01-27

## TL;DR

Critically ill patients have weakened antibody defenses against gut bacteria, increasing their risk of hospital infections.

## Contribution

This study reveals a link between impaired antibody responses to gut pathobionts and increased susceptibility to ICU-acquired infections.

## Key findings

- ICU patients showed reduced IgM and IgG reactivity against gut pathobionts like E. coli and K. pneumoniae.
- Low antibody responses were associated with B cell lymphopenia and microbiota dysbiosis.
- Reduced antibody reactivity to Gram-negative gut bacteria increased risk of nosocomial infection or death.

## Abstract

Critically ill patients in intensive care units (ICUs) experience high rates of hospital-acquired (nosocomial) infections, commonly caused by translocation and dissemination of pathogenic microorganisms that colonize the intestinal tract (pathobionts). Multiple immune barriers protect the host against commensal and pathogenic colonizers, including a repertoire of circulating anti-commensal antibodies. The integrity of this systemic antibody-mediated defense system, its relationship with gut microbiota dysbiosis, and its impact on nosocomial infections in the ICU have not been explored.

We performed a longitudinal cohort study of 46 critically ill patients at day 1 and day 3 of their ICU admission compared to 28 healthy volunteer controls. Circulating IgM, IgG, and IgA responses against 10 common gut and extra-intestinal pathobionts were quantified by flow cytometry, together with high-dimensional analyses of circulating B cell populations, fecal microbiota composition, and clinical outcomes. We observed reduced plasma IgM and IgG reactivity against intestinal pathobionts such as Escherichia coli, Klebsiella pneumoniae, and Enterococcus faecalis in ICU patients compared to healthy volunteers. Reduced gut pathobiont antibody responses in ICU patients was associated with B cell lymphopenia, and patients with gut microbiota dysbiosis had reduced levels of natural antibody producing B1-like B cells. Reduced IgG and IgM reactivity against gut Gram-negative pathobionts was associated with an increased risk of nosocomial infection or death.

These findings indicate that the systemic antibody barrier against microbiota pathobionts is compromised in critical illness and associated with increased risk of nosocomial infections.

The online version contains supplementary material available at 10.1186/s40635-026-00860-1.

## Linked entities

- **Diseases:** nosocomial infections (MONDO:0043544)
- **Species:** Escherichia coli (taxon 562), Klebsiella pneumoniae (taxon 573), Enterococcus faecalis (taxon 1351)

## Full-text entities

- **Genes:** CD79A (CD79a molecule) [NCBI Gene 973] {aka IGA, IGAlpha, MB-1, MB1}, CD19 (CD19 molecule) [NCBI Gene 930] {aka B4, CVID3}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, CD1D (CD1d molecule) [NCBI Gene 912] {aka R3, R3G1}, SFTPA1 (surfactant protein A1) [NCBI Gene 653509] {aka COLEC4, ILD1, PSP-A, PSPA, SFTP1, SFTPA1B}
- **Diseases:** Infections (MESH:D007239), C. difficile Infection (MESH:D003015), neutrophil dysfunction (MESH:C564942), GI malignancy (MESH:D009369), end-organ dysfunction (MESH:D009102), UTI (MESH:D014552), infectious complications (MESH:D003141), BSI (MESH:D018805), candidiasis (MESH:D002177), HIV infection (MESH:D015658), Critically ill (MESH:D016638), VAP (MESH:D053717), inflammatory bowel disease (MESH:D015212), COVID-19 (MESH:D000086382), neurological emergencies (MESH:D004630), immune dysfunction (MESH:D007154), Nosocomial infections (MESH:D003428), Dysbiosis (MESH:D064806), congenital or acquired immunodeficiency (MESH:D000163), death (MESH:D003643), trauma (MESH:D014947), pneumonia (MESH:D011014), B lymphopenia (MESH:D008231)
- **Chemicals:** DAPI (MESH:C007293), CFW (-), AF647 (MESH:C569686), metal (MESH:D008670), Pd (MESH:D010165), PBS (MESH:D007854)
- **Species:** Enterobacteriaceae (enterobacteria, family) [taxon 543], Staphylococcus epidermidis (species) [taxon 1282], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Enterobacter cloacae (species) [taxon 550], Enterococcus faecalis (species) [taxon 1351], Klebsiella aerogenes (species) [taxon 548], Escherichia coli (E. coli, species) [taxon 562], Klebsiella oxytoca (species) [taxon 571], Mus musculus (house mouse, species) [taxon 10090], Klebsiella pneumoniae (species) [taxon 573], Candida albicans (species) [taxon 5476], Homo sapiens (human, species) [taxon 9606], Pseudomonas aeruginosa (species) [taxon 287], gut metagenome (species) [taxon 749906]
- **Cell lines:** SH1000 — Homo sapiens (Human), Maple syrup urine disease, Finite cell line (CVCL_CX07)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12847606/full.md

## References

10 references — full list in the complete paper: https://tomesphere.com/paper/PMC12847606/full.md

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Source: https://tomesphere.com/paper/PMC12847606