# Characteristics and Key Genetic Pathway Analysis of Cr(VI)-Resistant Bacillus subtilis Isolated from Contaminated Soil in Response to Cr(VI)

**Authors:** Yiran Zhu, Peng Chen, Muzi Li, Qi Zheng, Jianing Li, Fuliang Zhang, Pimiao Zheng, Jianzhu Liu

PMC · DOI: 10.3390/toxics14010053 · Toxics · 2026-01-04

## TL;DR

This study explores how a soil bacterium, Bacillus subtilis, resists toxic chromium pollution and could be used for environmental cleanup.

## Contribution

The paper identifies specific genetic pathways and transcriptional regulators in B. subtilis that enable resistance to Cr(VI).

## Key findings

- Cr(VI) exposure up-regulates the Spx gene and down-regulates the CtsR gene in B. subtilis.
- Genes related to redox balance, protein biosynthesis, and cysteine biosynthesis are key to Cr(VI) resistance.
- B. subtilis showed no harmful effects in mice and resisted digestive juices, suggesting potential for bioremediation.

## Abstract

With increasing industrialization, hexavalent chromium (Cr(VI)) is used in various metal smelting and other industries, which, in turn, causes hexavalent chromium pollution. This study aimed to investigate the characteristics of isolated Bacillus subtilis (B. subtilis) from high-Cr(VI) soils and to evaluate its safety. Genomic and transcriptomic analyses were performed to explore its Cr(VI) response mechanisms, and a mouse model (24 mice) was established to evaluate the safety of the bacterium at different concentrations. Key genetic findings showed that Cr(VI) exposure significantly up-regulated the Spx gene and down-regulated the CtsR gene—two critical transcriptional regulators involved in stress response and development that mediate Cr(VI) tolerance. Pathway analysis revealed that ribosome RNA, redox balance, protein biosynthesis, metabolism, and cysteine biosynthesis play a significant role in bacterial Cr(VI) resistance. In the in vivo experiment, it was observed that the small intestine (SI), liver, and spleen of the mice remained normal without any injuries. Different levels of the F3 isolate demonstrated the ability to resist colonization by digestive juices, as observed in the SI slides. Consequently, B. subtilis can endure high levels of Cr(VI) by regulating redox process genes, which makes it a potential candidate for further research in selecting safe, tolerant, and bio-remedial isolates for Cr(VI) treatment.

## Linked entities

- **Genes:** SPX (spexin hormone) [NCBI Gene 80763], Ctsr (cathepsin R) [NCBI Gene 56835]
- **Chemicals:** Cr(VI) (PubChem CID 29131)
- **Species:** Bacillus subtilis (taxon 1423), Mus musculus (taxon 10090)

## Full-text entities

- **Chemicals:** Cr(VI) (MESH:C074702), cysteine (MESH:D003545), metal (MESH:D008670)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Bacillus subtilis (species) [taxon 1423]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12846181/full.md

## References

37 references — full list in the complete paper: https://tomesphere.com/paper/PMC12846181/full.md

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Source: https://tomesphere.com/paper/PMC12846181