# Longitudinal Interaction Between Individualized Gut Microbial Dynamics and Diet Is Associated with Metabolic Health in School-Aged Children

**Authors:** Changcan Feng, Mingyue Yang, Zhongmin Yang, Xin Liao, Shanshan Jiang, Lingling Li, Haiyan Lin, Yujing Sun, Zehua Wei, Zhongming Weng, Daren Wu, Lingyu Zhang, Eytan Wine, Karen L. Madsen, Edward C. Deehan, Jian Li, Jun Zeng, Jingwen Liu, Zhengxiao Zhang, Chenxi Cai

PMC · DOI: 10.3390/nu18020187 · Nutrients · 2026-01-06

## TL;DR

This study shows that gut microbial stability in children is linked to diet and metabolic health, suggesting personalized approaches for dietary interventions.

## Contribution

The study identifies gut microbial dynamics as a potential biomarker for predicting individual responses to dietary interventions in children.

## Key findings

- Children with low gut microbial stability had worse blood lipid profiles and were associated with low dietary fiber intake.
- Phocaeicola vulgatus levels fluctuated in low-stability microbiota and were linked to blood triglycerides and diet.
- Baseline depletion of specific microbes predicted microbial stability with high accuracy (AUROC = 0.93).

## Abstract

Background/Objectives: Childhood metabolic dysregulation exerts a profound influence on the development of obesity and metabolic diseases. The human gut microbiota, with highly personalized characteristics, plays an important role in host metabolism. However, the dynamics of gut microbial features during this developmental phase are still unclear. This longitudinal observational study collected 204 fecal samples and 153 blood samples from 51 children (aged 8.90 ± 0.78 years) at four timepoints over 52 weeks, aiming to identify dynamic changes in individual gut microbiota and underlying mechanistic interactions that predict measures of pediatric metabolic health. Methods: Fecal samples were subjected to 16S rRNA gene amplicon sequencing and short-chain fatty acid quantification. Serum samples were analyzed for biochemical tests. Dietary intake, physical activity, clinical phenotypes, early-life factors, and fecal characteristics were further assessed. Results: In the results, the fecal microbiota dynamics exhibit inter-individual variation among children, allowing classification into high- and low-stability subgroups based on intra-individual β-diversity variability. Children with low-stability microbiota had adverse blood lipid profiles (p < 0.05). Compared to the high-stability group, the low-stability microbiota demonstrated significant association with low dietary fiber and highly variable amino acid consumption (|r| > 0.3, q < 0.05). Low-stability microbiota exhibited marked fluctuations in Phocaeicola vulgatus, which was strongly linked to both blood triglycerides and lipoprotein(a) levels, as well as dietary fiber and amino acid intake. Baseline depletion of P. vulgatus and Faecalibacterium duncaniae, combined with the children’s physiological status, lifestyle behaviors, and early-life factors, predicted microbial stability classification (AUROC = 0.93). Conclusions: These findings suggested that the variation in the gut microbiota dynamics could be considered as a possible complementary biomarker to understand the individualized responses within dietary interventions aimed at improving metabolic health in childhood. Further well-designed intervention study is needed to define these observational associations.

## Linked entities

- **Diseases:** obesity (MONDO:0011122)
- **Species:** Phocaeicola vulgatus (taxon 821), Faecalibacterium duncaniae (taxon 411483)

## Full-text entities

- **Diseases:** obesity (MESH:D009765), Metabolic (MESH:D008659)
- **Chemicals:** amino acid (MESH:D000596), lipid (MESH:D008055), short-chain fatty acid (MESH:D005232), triglycerides (MESH:D014280)
- **Species:** Philonthus vulgatus (species) [taxon 1896615], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

85 references — full list in the complete paper: https://tomesphere.com/paper/PMC12845436/full.md

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Source: https://tomesphere.com/paper/PMC12845436