# Synovial Joint Fluid Metabolomic Profiles and Pathways Differentiate Osteoarthritis, Rheumatoid Arthritis, and Psoriatic Arthritis

**Authors:** Ozan Kaplan, Rositsa Karalilova, Zguro Batalov, Konstantin Batalov, Maria Kazakova, Victoria Sarafian, Emine Koç, Mustafa Çelebier, Feza Korkusuz

PMC · DOI: 10.3390/metabo16010070 · 2026-01-12

## TL;DR

This study identifies unique metabolic profiles in joint fluid that can distinguish between three types of arthritis, offering potential new diagnostic tools and treatment targets.

## Contribution

The study reports previously unreported metabolites in psoriatic arthritis and provides distinct metabolic signatures for each arthritis type in synovial fluid.

## Key findings

- RA samples showed elevated itaconic acid and O-acetylserine, with decreased hypoxanthine.
- PsA exhibited unique elevations of 4,4-dimethylcholestane and 2-oxoarginine.
- OA demonstrated increased gut microbiota-related metabolites like hippuric acid and indoleacetic acid.

## Abstract

Background: Distinguishing between osteoarthritis (OA), rheumatoid arthritis (RA), and psoriatic arthritis (PsA) remains challenging despite different underlying mechanisms. Synovial fluid reflects metabolic changes within affected joints, yet comprehensive metabolomic comparisons across these conditions are limited. We aimed to identify disease-specific metabolic signatures in synovial fluid that could improve differential diagnosis and reveal therapeutic targets. Methods: We collected synovial fluid from 39 patients (20 OA, 5 RA, and 14 PsA) during routine knee arthrocentesis between January 2023 and February 2024. Following metabolite extraction, we performed untargeted metabolomic profiling using quadrupole time-of-flight liquid chromatography–mass spectrometry (Q-TOF LC/MS). Data underwent multivariate statistical analysis, including principal component analysis (PCA) and partial least squares–discriminant analysis (PLS-DA), to identify discriminatory metabolites. Results: While unsupervised analysis showed overlap between groups, supervised PLS-DA achieved clear metabolic separation. RA samples showed elevated itaconic acid, indicating inflammatory macrophage activation, and increased O-acetylserine, suggesting altered one-carbon metabolism. Hypoxanthine was decreased, which reflected severe metabolic stress. PsA exhibited the unique elevation of 4,4-dimethylcholestane and 2-oxoarginine. These metabolites have previously been unreported in this disease. OA demonstrated increased hippuric acid and indoleacetic acid, which are both gut microbiota products, supporting the gut–joint axis hypothesis. Conclusions: Each arthritis type displayed distinct metabolic fingerprints in synovial fluid. Candidate discriminatory metabolites, including gut-derived metabolites in OA and specific lipid alterations in PsA, open new diagnostic and therapeutic avenues. Given the limited RA sample size (n = 5), RA-related results should be viewed as exploratory and requiring validation in larger independent cohorts. These metabolites may, after rigorous validation in larger and independent cohorts, contribute to multi-metabolite biomarker panels for earlier diagnosis and to the rational design of targeted therapeutics addressing disease-specific metabolic disruptions.

## Linked entities

- **Chemicals:** itaconic acid (PubChem CID 811), O-acetylserine (PubChem CID 189), hypoxanthine (PubChem CID 135398638), 4,4-dimethylcholestane (PubChem CID 129703393), 2-oxoarginine (PubChem CID 558), hippuric acid (PubChem CID 464), indoleacetic acid (PubChem CID 802)
- **Diseases:** osteoarthritis (MONDO:0005178), rheumatoid arthritis (MONDO:0008383), psoriatic arthritis (MONDO:0011849)

## Full-text entities

- **Diseases:** PsA (MESH:D015535), inflammatory (MESH:D007249), arthritis (MESH:D001168), metabolic disruptions (MESH:D019958), OA (MESH:D010003), RA (MESH:D001172)
- **Chemicals:** hippuric acid (MESH:C030514), itaconic acid (MESH:C005229), lipid (MESH:D008055), Hypoxanthine (MESH:D019271), O-acetylserine (MESH:C043943), indoleacetic acid (MESH:C030737), 2-oxoarginine (-)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12844152/full.md

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Source: https://tomesphere.com/paper/PMC12844152