# Respiratory and Pleural Pathogens in Octogenarians Hospitalized with COVID-19: Impact of Secondary Bacterial Pneumonia on Day-5 SOFA and Mortality

**Authors:** Petrinela Daliu, Felix Bratosin, Ovidiu Rosca, Monica Licker, Elena Hogea, Livia Stanga, Camelia Vidita Gurban, Delia Muntean

PMC · DOI: 10.3390/microorganisms14010164 · 2026-01-12

## TL;DR

Older adults with COVID-19 are more likely to develop secondary bacterial pneumonia, which worsens their condition and increases mortality.

## Contribution

The study identifies the specific impact of secondary bacterial pneumonia on organ dysfunction and mortality in octogenarians with COVID-19.

## Key findings

- Secondary bacterial pneumonia was associated with higher day-5 SOFA and APACHE II scores in older adults.
- Octogenarians had a significantly higher 28-day mortality rate when they developed superimposed pneumonia.
- Empyema was more common in older adults, and pleural cultures were frequently positive.

## Abstract

Background and Objectives: Secondary bacterial infection drives poor outcomes in older adults with COVID-19, but age-specific microbiology and its interaction with severity scores are not well defined. We characterized respiratory and pleural pathogens, resistance profiles, and their impact on day-5 SOFA/APACHE II in octogenarians versus younger adults. Methods: We performed a retrospective cohort study of adults with RT-PCR-confirmed coronavirus disease 2019 (COVID-19) at a tertiary infectious diseases center (≥80 years, n = 152; <65 years, n = 327). Respiratory and pleural samples were processed according to EUCAST standards. Identification employed matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). Pathogen distributions, susceptibilities, and rates of superimposed pneumonia, empyema, and bacteremia were compared by age, and associations between secondary pneumonia, day-5 SOFA/APACHE II, and 28-day mortality were analyzed. Results: Sputum was obtained in 67.1% of older and 65.7% of younger adults, with numerically higher culture positivity in older patients (73.5% vs. 65.1%). Pathogen spectra were similar, dominated by Streptococcus pneumoniae (24.0% vs. 24.3%), methicillin-susceptible Staphylococcus aureus (MSSA) (18.7% vs. 20.7%), methicillin-resistant Staphylococcus aureus (MRSA) (9.3% vs. 6.4%), and Klebsiella pneumoniae, including extended-spectrum β-lactamase (ESBL)-producing strains. Empyema was more frequent in octogenarians (7.9% vs. 3.1%), and pleural cultures were usually positive. Meropenem retained 100% activity against ESBL-producing K. pneumoniae and Pseudomonas in both strata. In ≥80-year-olds, superimposed pneumonia was associated with higher day-5 SOFA (6.6 vs. 5.5) and APACHE II (24.3 vs. 21.0) scores and markedly increased 28-day mortality (37.5% vs. 9.8%). Conclusions: In octogenarians with COVID-19, secondary bacterial pneumonia and empyema are frequent, microbiologically similar to younger adults, and strongly amplify organ dysfunction and mortality even with largely preserved carbapenem susceptibility.

## Linked entities

- **Diseases:** coronavirus disease 2019 (MONDO:0100096), bacterial pneumonia (MONDO:0004652), empyema (MONDO:0005242), bacteremia (MONDO:0005229)
- **Species:** Streptococcus pneumoniae (taxon 1313), Staphylococcus aureus (taxon 1280), Klebsiella pneumoniae (taxon 573), Pseudomonas (taxon 286)

## Full-text entities

- **Genes:** extended-spectrum beta-lactamase [NCBI Gene 13982007]
- **Diseases:** bacterial infection (MESH:D001424), Empyema (MESH:D004653), infectious diseases (MESH:D003141), organ dysfunction (MESH:D009102), COVID-19 (MESH:D000086382), bacteremia (MESH:D016470), Bacterial Pneumonia (MESH:D018410), pneumonia (MESH:D011014)
- **Chemicals:** carbapenem (MESH:D015780), methicillin (MESH:D008712), Meropenem (MESH:D000077731)
- **Species:** Staphylococcus aureus (species) [taxon 1280], Streptococcus pneumoniae (species) [taxon 1313], Pseudomonas (RNA similarity group I, genus) [taxon 286], Homo sapiens (human, species) [taxon 9606], Klebsiella pneumoniae (species) [taxon 573]

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12843609/full.md

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Source: https://tomesphere.com/paper/PMC12843609