# Characterization of Large Extracellular Vesicles Released by Apoptotic and Pyroptotic Cells

**Authors:** Delaram Khamari, Nora Fekete, Ririka Tamura, Raeeka Khamari, Agnes Kittel, Bence Nagy, Luigi Menna, Zsuzsanna Darula, Alicia Galinsoga, Eva Hunyadi-Gulyas, Maximilien Bencze, Edit I. Buzas

PMC · DOI: 10.3390/ijms27020976 · 2026-01-19

## TL;DR

This study explores large extracellular vesicles released during cell death, revealing distinct protein profiles that could help understand their role in health and disease.

## Contribution

The study identifies unique molecular signatures of large EVs released during apoptosis and pyroptosis, offering new insights into their biological roles.

## Key findings

- Apoptotic and pyroptotic cells release large EVs with distinct proteomic profiles.
- Pyroptotic EVs contain RNA-binding and chromatin-associated proteins, while apoptotic EVs carry dsDNA and active caspase-3/7.
- EVs from dying cells show increased Annexin V binding and decreased CD9 expression.

## Abstract

Extracellular vesicles (EVs) are emerging as key factors in maintaining cellular homeostasis, critical mediators of intercellular communication, potential biomarkers, and therapeutic tools. While small EVs have been extensively characterized, the molecular signatures of large EVs (including those generated during regulated cell death pathways) remain poorly defined. Here, we investigated the characteristics of large EVs released during apoptosis and pyroptosis by human monocytic cell lines (THP-1 and U937). Apoptosis was induced by staurosporine and blocked using the pan-caspase inhibitor Q-VD-OPh, whereas pyroptosis was triggered by LPS/nigericin and inhibited with a selective NLRP3 inhibitor. We found that both forms of regulated cell death markedly enhanced the release of large EVs. Both apoptotic and pyroptotic large EVs showed increased Annexin V binding and decreased CD9 expression compared with those released by healthy cells. Large EVs derived from apoptotic and pyroptotic cells exhibited distinct proteomic profiles. Pyroptotic large EVs carried interacting protein networks of RNA-binding proteins and chromatin-associated proteins many of which are known damage-associated molecular patterns or alarmins. In contrast, we found that a subpopulation of apoptotic large EVs was characterized by the presence of dsDNA, and active caspase-3/7. Together, our data shed light on the specific protein cargo of large EVs released by cells during apoptosis and pyroptosis. This study identifies candidate markers of large EVs released by dying cells and may enhance our understanding of the role of EVs in regulated cell death.

## Linked entities

- **Proteins:** CD9 (CD9 molecule), Casp3 (caspase 3), Casp7 (caspase 7), NLRP3 (NLR family pyrin domain containing 3)
- **Chemicals:** staurosporine (PubChem CID 5279), Q-VD-OPh (PubChem CID 24794416), nigericin (PubChem CID 34230)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** CD9 (CD9 molecule) [NCBI Gene 928] {aka BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29}, ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}, NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548] {aka AGTAVPRL, AII, AVP, C1orf7, CIAS1, CLR1.1}
- **Chemicals:** LPS (MESH:D008070), staurosporine (MESH:D019311), Q-VD-OPh (MESH:C468548), nigericin (MESH:D009550)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12841904/full.md

---
Source: https://tomesphere.com/paper/PMC12841904