# Plant-Derived miR-55 Alleviates Liver Fibrosis by Disrupting the CK2α/SMO Complex and Promoting SMO Ubiquitination

**Authors:** Lei Wu, Jing Yang, Anqi Li, Yuqiang Zhao, Qing Liu, Zhenbo Li, Yihan Liu, Peng Tang, Rui Wang

PMC · DOI: 10.3390/ijms27020748 · 2026-01-12

## TL;DR

A plant-based miRNA called miR-55, delivered orally, reduces liver fibrosis by disrupting a protein complex and promoting degradation of a key signaling protein.

## Contribution

miR-55 is shown to alleviate liver fibrosis via a novel mechanism involving disruption of the CK2α/SMO complex and SMO ubiquitination.

## Key findings

- Oral delivery of miR-55 improved liver injury, lipid dysregulation, and collagen deposition in a rat model.
- miR-55 disrupts the CK2α/SMO complex, leading to SMO ubiquitination and degradation, and inhibits the Gli1 pathway.
- miR-55 downregulates fibrogenic and pro-inflammatory genes, achieving effects comparable to a traditional herbal decoction.

## Abstract

The development of RNA-based drugs for MAFLD-related fibrosis is severely hampered by the poor oral bioavailability of nucleic acids. This study employed a novel, patent-protected LNP formulation to orally deliver plant-derived miR-55 and investigate its therapeutic potential, focusing on its novel mechanism of action via the CK2α/SMO interaction. In a rat model established with a methionine-choline-deficient diet, orally administered miR-55 markedly improved liver injury, lipid dysregulation, oxidative stress, and pathological collagen deposition. The anti-fibrotic efficacy was quantitatively confirmed by a significant reduction in hepatic hydroxyproline content and downregulation of key fibrogenic genes (Col1a1, Col3a1, TIMP-1, TGF-β1, CTGF) and pro-inflammatory cytokines (TNF-α, IL-6), achieving effects comparable to the full Ge Xia Zhu Yu Decoction. Mechanistically, both bioinformatic prediction and in vivo validation indicated that miR-55 is predicted to target CK2α. This targeting suppressed CK2α expression and disrupted the endogenous CK2α-SMO complex, thereby promoting the ubiquitin-mediated degradation of SMO—a previously unreported mechanism. This cascade inhibited the downstream Gli1 pathway and downregulated pro-fibrotic and pro-angiogenic factors (VEGF, PDGF), thereby providing a comprehensive mechanistic basis for the therapeutic effects. This study is the first to provide evidence that orally delivered, plant-derived miR-55 may act as a natural modulator that potentially through disrupting the CK2α/SMO interaction via a unique complex disruption-promoted degradation mechanism, attenuating Hedgehog signaling and alleviating liver fibrosis. These findings offer important insights into cross-kingdom regulation and highlight miR-55 as a potential targeted therapeutic candidate.

## Linked entities

- **Genes:** COL1A1 (collagen type I alpha 1 chain) [NCBI Gene 1277], COL3A1 (collagen type III alpha 1 chain) [NCBI Gene 1281], TIMP1 (TIMP metallopeptidase inhibitor 1) [NCBI Gene 7076], TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040], CCN2 (cellular communication network factor 2) [NCBI Gene 1490], GLI1 (GLI family zinc finger 1) [NCBI Gene 2735], VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422], pdgfa.S (platelet derived growth factor subunit A S homeolog) [NCBI Gene 397765]
- **Proteins:** ck2a (casein kinase 2 alpha subunit), SMO (smoothened, frizzled class receptor)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Col1a1 (collagen type I alpha 1 chain) [NCBI Gene 29393] {aka COLIA1}, Smo (smoothened, frizzled class receptor) [NCBI Gene 25273] {aka Smoh}, Gli1 (GLI family zinc finger 1) [NCBI Gene 140589] {aka Gli}, Il6 (interleukin 6) [NCBI Gene 24498] {aka ILg6, Ifnb2}, Timp1 (TIMP metallopeptidase inhibitor 1) [NCBI Gene 116510] {aka TIMP-1, Timp}, Col3a1 (collagen type III alpha 1 chain) [NCBI Gene 84032], Ccn2 (cellular communication network factor 2) [NCBI Gene 64032] {aka CTGRP, Ctgf}, Tnf (tumor necrosis factor) [NCBI Gene 24835] {aka RATTNF, TNF-alpha, Tnfa}, Tgfb1 (transforming growth factor, beta 1) [NCBI Gene 59086] {aka Tgfb}, Vegfa (vascular endothelial growth factor A) [NCBI Gene 83785] {aka VEGF-A, VEGF111, VEGF164, VPF, Vegf}
- **Diseases:** inflammatory (MESH:D007249), liver injury (MESH:D017093), fibrosis (MESH:D005355), Liver Fibrosis (MESH:D008103)
- **Chemicals:** hydroxyproline (MESH:D006909), choline (MESH:D002794), lipid (MESH:D008055), methionine (MESH:D008715), LNP (-)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116]

## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12840694/full.md

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Source: https://tomesphere.com/paper/PMC12840694