# Synchronizing the Liver Clock: Time-Restricted Feeding Aligns Rhythmic Gene Expression in Key Metabolic Pathways

**Authors:** Shiyan Liu, Feng Zhang, Yiming Wang, Kailin Zhuo, Yingying Zhao

PMC · DOI: 10.3390/cells15020193 · Cells · 2026-01-20

## TL;DR

Time-restricted feeding helps align liver gene activity with daily rhythms, improving metabolism and potentially treating fatty liver disease.

## Contribution

The study reveals that time-restricted feeding can restore circadian gene expression in metabolic pathways, offering a new mechanism for its health benefits.

## Key findings

- Time-restricted feeding improved metabolic outcomes like lipid accumulation and glucose tolerance in mice.
- TRF induced rhythmic gene expression in previously arrhythmic genes related to autophagy and fatty acid metabolism.
- Transcriptional synchronization within metabolic pathways enhances metabolic efficiency and reduces energy waste.

## Abstract

Non-alcoholic fatty liver disease (NAFLD) is closely linked to metabolic syndrome and circadian rhythm disruption, yet the mechanisms by which lifestyle interventions restore circadian organization remain incompletely understood. In this study, we employed a stringent 3 h time-restricted feeding (TRF) regimen in a mouse model of high-fat diet (HFD)-induced metabolic dysfunction. TRF markedly improved metabolic outcomes, including lipid accumulation, glucose tolerance, and behavioral and physiological rhythms. Importantly, through transcriptomic profiling using RNA sequencing, we found that TRF induced circadian rhythmicity in previously arrhythmic hepatic genes. This approach revealed that TRF promotes transcriptional synchronization within key metabolic pathways. Genes involved in autophagy, fatty acid metabolism, and protein catabolism exhibited coherent peak expression at defined time windows, suggesting that TRF temporally restructures gene networks to enhance metabolic efficiency. This intra-pathway synchronization likely minimizes energy waste and enables cells to execute specialized functions in a temporally optimized manner. Together, our findings identify temporal reorganization of metabolic pathways as a mechanistic basis for the benefits of TRF, providing new insight into circadian-based strategies for managing metabolic disease.

## Linked entities

- **Diseases:** non-alcoholic fatty liver disease (MONDO:0013209), metabolic syndrome (MONDO:0000816)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** arrhythmic (OMIM:212500), metabolic disease (MESH:D008659), metabolic syndrome (MESH:D024821), NAFLD (MESH:D065626)
- **Chemicals:** fat (MESH:D005223), glucose (MESH:D005947), fatty acid (MESH:D005227), lipid (MESH:D008055)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12839592/full.md

## References

55 references — full list in the complete paper: https://tomesphere.com/paper/PMC12839592/full.md

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Source: https://tomesphere.com/paper/PMC12839592