# Three-Dimensional Tumor Spheroids Reveal B7-H3 CAR T Cell Infiltration Dynamics and Microenvironment-Induced Functional Reprogramming in Solid Tumors

**Authors:** Feng Chen, Ke Ning, Yuanyuan Xie, Xiaoyan Yang, Ling Yu, Xinhui Wang

PMC · DOI: 10.3390/cells15020169 · Cells · 2026-01-16

## TL;DR

A 3D tumor model shows how CAR T cells interact with solid tumors and how the tumor environment affects their function.

## Contribution

A novel 3D spheroid platform is introduced to study CAR T cell infiltration and function in solid tumors.

## Key findings

- 3D spheroids from prostate and breast cancer cells mimic TME barriers and alter immune markers.
- CAR T cells infiltrate and disrupt spheroids while showing signs of activation and exhaustion.
- The 3D model provides a better preclinical tool for evaluating CAR T therapies compared to 2D assays.

## Abstract

Chimeric antigen receptor (CAR) T cell therapy has demonstrated clinical success in hematologic malignancies but has limited efficacy in solid tumors due to tumor microenvironment (TME) barriers that impede CAR T cell recognition, infiltration, and sustained function. Traditional 2D assays inadequately recapitulate these constraints, necessitating improved in vitro models. This study validated a 3D tumor spheroid platform using an agarose microwell system to generate uniform B7-H3-positive spheroids from multiple solid tumor cell lines, enabling the evaluation of CAR T cell activity. TME-relevant immune modulation under 3D conditions was analyzed by flow cytometry for B7-H3, MHC I/II, and antigen processing machinery (APM), followed by co-culture with B7-H3 CAR T cells to assess cytotoxicity, spheroid integrity, tumor viability, and CAR T cell activation, exhaustion, and cytokine production. Two human cancer-cell-line-derived spheroids, DU 145 (prostate cancer) and SUM159 (breast cancer), retained B7-H3 expression, while MC38 (mouse colon cancer)-derived spheroids served as a B7-H3 negative control. Under 3D culture conditions, DU 145 and SUM159 spheroids acquire TME-like immune evasion characteristics and specifically downregulated MHC-I and APM (TAP1, TAP2, LMP7) with concurrent upregulation of MHC-II and calreticulin. Co-culture showed effective spheroid infiltration, cytotoxicity, and structural disruption, with infiltrating CAR T cells displaying higher CD4+ fraction, activation, exhaustion, effector/terminal differentiation, and IFN-γ/TNF-α production. This 3D platform recapitulates critical TME constraints and provides a cost-effective, feasible preclinical tool to assess CAR T therapies beyond conventional 2D assays.

## Linked entities

- **Genes:** CD276 (CD276 molecule) [NCBI Gene 80381], MHC-I (BOLA class I histocompatibility antigen, alpha chain BL3-7) [NCBI Gene 100009719], H2 (histocompatibility-2, MHC) [NCBI Gene 111364], ANPEP (alanyl aminopeptidase, membrane) [NCBI Gene 290], TAP1 (transporter 1, ATP binding cassette subfamily B member) [NCBI Gene 6890], TAP2 (transporter 2, ATP binding cassette subfamily B member) [NCBI Gene 6891], PSMB8 (proteasome 20S subunit beta 8) [NCBI Gene 5696]
- **Diseases:** prostate cancer (MONDO:0005159), breast cancer (MONDO:0004989)
- **Species:** Homo sapiens (taxon 9606), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** TAP1 (transporter 1, ATP binding cassette subfamily B member) [NCBI Gene 6890] {aka ABC17, ABCB2, APT1, D6S114E, MHC1D1, PSF-1}, PSMB8 (proteasome 20S subunit beta 8) [NCBI Gene 5696] {aka ALDD, D6S216, D6S216E, JMP, LMP7, NKJO}, CD276 (CD276 molecule) [NCBI Gene 80381] {aka 4Ig-B7-H3, B7-H3, B7H3, B7RP-2}, TAP2 (transporter 2, ATP binding cassette subfamily B member) [NCBI Gene 6891] {aka ABC18, ABCB3, APT2, D6S217E, MHC1D2, PSF-2}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, CALR (calreticulin) [NCBI Gene 811] {aka CALR1, CRT, HEL-S-99n, RO, SSA, cC1qR}
- **Diseases:** Solid Tumors (MESH:D009369), cytotoxicity (MESH:D064420), solid (MESH:D018250), colon cancer (MESH:D015179), breast cancer (MESH:D001943), hematologic malignancies (MESH:D019337), prostate cancer (MESH:D011471)
- **Chemicals:** CAR T (-), agarose (MESH:D012685)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12839577/full.md

## References

43 references — full list in the complete paper: https://tomesphere.com/paper/PMC12839577/full.md

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Source: https://tomesphere.com/paper/PMC12839577