# METTL1 interacts with XPO5 to modulate pre-miRNA export

**Authors:** Zhongwen Cao, Xingyuan Chen, Yuxiang Sun, Yinsheng Wang

PMC · DOI: 10.1093/nar/gkag037 · Nucleic Acids Research · 2026-01-27

## TL;DR

The study reveals that METTL1, known for RNA methylation, also regulates pre-miRNA export by interacting with XPO5, a nuclear export factor.

## Contribution

Discovers a non-canonical role for METTL1 in modulating XPO5 localization and miRNA maturation independent of its methyltransferase activity.

## Key findings

- METTL1 interacts with XPO5, a key nuclear export factor for pre-miRNA.
- METTL1 promotes XPO5 nuclear retention via ERK-mediated phosphorylation.
- Loss of METTL1 accelerates pre-miRNA export and miRNA maturation.

## Abstract

While METTL1 is a well-established m7G writer protein, its protein–protein interaction network remains largely unexplored. To map the METTL1 interactome in HEK293T cells, we employed APEX2-mediated proximity labeling coupled with LC-MS/MS analysis. This approach allowed for the identification of 60 and 18 unique proteins significantly enriched in the METTL1 proximity proteome compared to enhanced green fluorescent protein (EGFP) and nuclear localization signal (NLS) controls, respectively. Among these proteins, we found exportin-5 (XPO5), a nuclear export factor critical for pre-miRNA transport. We validated the METTL1–XPO5 interaction by co-immunoprecipitation and western blot analysis. Strikingly, genetic ablation of METTL1 caused XPO5 to redistribute to the cytosol, which in turn accelerated pre-miRNA export and enhanced miRNA maturation. This function of METTL1 was independent of its canonical m7G methyltransferase activity. Mechanistically, we found that METTL1 facilitates ERK-mediated phosphorylation of XPO5, thereby promoting its nuclear retention. Accordingly, constitutive activation of ERK was sufficient to restore nuclear XPO5 localization in METTL1-deficient cells. In summary, our study uncovers a non-canonical role for METTL1 in regulating the subcellular distribution of XPO5 and pre-miRNA export, revealing a novel mechanism of miRNA maturation that extends METTL1’s function beyond m7G methylation.

Graphical Abstract

## Linked entities

- **Genes:** METTL1 (methyltransferase 1, tRNA methylguanosine) [NCBI Gene 4234], XPO5 (exportin 5) [NCBI Gene 57510], EPHB2 (EPH receptor B2) [NCBI Gene 2048]
- **Proteins:** METTL1 (methyltransferase 1, tRNA methylguanosine), XPO5 (exportin 5), EPHB2 (EPH receptor B2)

## Full-text entities

- **Genes:** APEX2 (apurinic/apyrimidinic endodeoxyribonuclease 2) [NCBI Gene 27301] {aka APE2, APEXL2, XTH2, ZGRF2}, XPO5 (exportin 5) [NCBI Gene 57510] {aka exp5}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, METTL1 (methyltransferase 1, tRNA methylguanosine) [NCBI Gene 4234] {aka C12orf1, TRM8, TRMT8, YDL201w}

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12839532/full.md

## References

33 references — full list in the complete paper: https://tomesphere.com/paper/PMC12839532/full.md

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Source: https://tomesphere.com/paper/PMC12839532