# RNAa-Mediated Gene Activation in the Regulation of Stem Cell Fate

**Authors:** Hyohi Lee, Jiin Moon, Seung-Kyoon Kim

PMC · DOI: 10.3390/biom16010005 · Biomolecules · 2025-12-19

## TL;DR

This paper reviews how RNA molecules can activate genes to control stem cell behavior, offering a new way to influence cell fate through epigenetic changes.

## Contribution

The paper provides a comprehensive review of RNAa mechanisms and their role in stem cell regulation, emphasizing their potential for precise cell fate control.

## Key findings

- RNAa involves both synthetic and endogenous RNA molecules that activate gene expression in stem cells.
- RNAa modulates chromatin accessibility and transcriptional machinery to regulate stem cell pluripotency and differentiation.
- RNAa is an evolutionarily conserved mechanism with potential for epigenetic-based cell fate manipulation.

## Abstract

Stem cell fate is governed by complex transcriptional networks and dynamic chromatin architectures, with RNA molecules acting as critical regulators. Traditionally, small RNAs have been associated with gene silencing; however, growing evidence reveals that certain RNA species can also activate transcription, a phenomenon termed RNA activation (RNAa). This evolutionarily conserved mechanism functions through both synthetic small activating RNAs (saRNAs) and endogenous RNA molecules, including promoter-targeting microRNAs, small modulatory double-stranded RNAs, and circular RNAs. By modulating chromatin accessibility and engaging the transcriptional machinery, these RNAs orchestrate gene expression programs that control pluripotency maintenance and lineage-specific differentiation in stem cells. This review integrates emerging mechanistic insights and functional evidence to provide a comprehensive perspective on RNAa-mediated gene activation in stem cell biology and highlights its potential as a precise tool for controlling cell fate through epigenetic modulation.

## Full text

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## Figures

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## References

141 references — full list in the complete paper: https://tomesphere.com/paper/PMC12839409/full.md

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Source: https://tomesphere.com/paper/PMC12839409