# Circadian Clock Genes in Colorectal Cancer: From Molecular Mechanisms to Chronotherapeutic Applications

**Authors:** Haoran Wang, Jieru Zhou, Suya Pang, Yiqing Mei, Gangping Li, Yu Jin, Rong Lin

PMC · DOI: 10.3390/biomedicines14010110 · Biomedicines · 2026-01-06

## TL;DR

This review explores how circadian clock genes influence colorectal cancer and how understanding them could lead to better treatments.

## Contribution

The paper systematically summarizes the roles of core circadian clock genes in CRC and their potential for chronotherapeutic applications.

## Key findings

- Core circadian clock genes regulate CRC progression through cell cycle control and EMT.
- Disruption of circadian rhythms is linked to CRC prognosis and chemosensitivity.
- Chronotherapeutic strategies show translational potential for CRC treatment.

## Abstract

Colorectal cancer (CRC) is a life-threatening malignancy, but our understanding of its pathogenic mechanisms remains incomplete—posing a major constraint on the development of effective therapeutic strategies. The transcription-translation feedback loop of clock genes (e.g., BMAL1, CLOCK, PER1/2/3, and CRY1/2) provides a promising novel avenue for deciphering the initiation and progression of CRC. Mounting evidence indicates that core circadian clock genes play pivotal roles in CRC oncogenesis by orchestrating the regulation of the cell cycle, epithelial–mesenchymal transition (EMT), metabolic reprogramming, and the tumor microenvironment. This review systematically summarizes the expression patterns and mechanistic roles of core clock genes in CRC, while elucidating their molecular underpinnings in tumor progression via key signaling cascades (e.g., Wnt/β-catenin and c-Myc/p21 pathways). We emphasize the associations between circadian disruption and CRC—including diagnostic markers, prognostic assessment, and chemosensitivity—and provide an in-depth discussion of chronotherapeutic strategies and their translational potential. Finally, we identify unaddressed scientific questions and propose future research directions to facilitate the development of novel targeted therapies for CRC.

## Linked entities

- **Genes:** BMAL1 (basic helix-loop-helix ARNT like 1) [NCBI Gene 406], CLOCK (clock circadian regulator) [NCBI Gene 9575], PER1 (period circadian regulator 1) [NCBI Gene 5187], PER2 (period circadian regulator 2) [NCBI Gene 8864], PER3 (period circadian regulator 3) [NCBI Gene 8863], CRY1 (cryptochrome circadian regulator 1) [NCBI Gene 1407], CRY2 (cryptochrome circadian regulator 2) [NCBI Gene 1408]
- **Diseases:** colorectal cancer (MONDO:0005575), CRC (MONDO:0005575)

## Full-text entities

- **Genes:** MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, CLOCK (clock circadian regulator) [NCBI Gene 9575] {aka KAT13D, bHLHe8}, BMAL1 (basic helix-loop-helix ARNT like 1) [NCBI Gene 406] {aka ARNTL, ARNTL1, BMAL1c, JAP3, MOP3, PASD3}, H3P16 (H3 histone pseudogene 16) [NCBI Gene 644914] {aka H3.6, H3F3AP6, p21}
- **Diseases:** malignancy (MESH:D009369), CRC (MESH:D015179)

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12839077/full.md

## References

103 references — full list in the complete paper: https://tomesphere.com/paper/PMC12839077/full.md

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Source: https://tomesphere.com/paper/PMC12839077