# From Transcriptome to Therapy: The ncRNA Revolution in Neurodevelopmental Disorders

**Authors:** Jiayi Zhao, Shanshan Li, Xin Jin

PMC · DOI: 10.3390/brainsci16010017 · Brain Sciences · 2025-12-23

## TL;DR

Non-coding RNAs are key regulators in neurodevelopmental disorders and offer new diagnostic and therapeutic possibilities.

## Contribution

This paper highlights the role of diverse non-coding RNAs in neurodevelopmental disorders and their potential for RNA-based therapies.

## Key findings

- Non-coding RNAs regulate neural differentiation, synaptic plasticity, and intercellular signaling in neurodevelopmental disorders.
- Circulating non-coding RNAs in extracellular vesicles show promise as biomarkers for early diagnosis and patient stratification.
- Advances in RNA interference and CRISPR-based editing offer new therapeutic strategies for targeting non-coding RNAs.

## Abstract

Neurodevelopmental disorders (NDDs) such as autism spectrum disorder (ASD), attention-deficit/hyperactivity disorder (ADHD), and intellectual disability (ID) arise from disruptions of molecular programmes that coordinate neurogenesis, synaptogenesis, and circuit maturation. While genomic studies have identified numerous susceptibility loci, genetic variation alone accounts for only part of disease heritability, underscoring the importance of post-transcriptional and epigenetic regulation. Among these regulatory layers, non-coding RNAs (ncRNAs), including microRNAs (miRNAs), long non-coding RNAs (lncRNAs), circular RNAs (circRNAs), PIWI-interacting RNAs (piRNAs), and transfer RNA-derived small RNAs (tsRNAs), have emerged as central modulators of neural differentiation, synaptic plasticity, and intercellular signalling. Recent multi-omics and single-cell studies reveal that ncRNAs fine-tune chromatin accessibility, transcriptional output, and translation through tightly integrated regulatory networks. miRNAs shape neurogenic transitions and circuit refinement; lncRNAs and circRNAs couple chromatin architecture to activity-dependent transcription; and tsRNAs and piRNAs extend this regulation by linking translational control to epigenetic memory and environmental responsiveness. Spatial transcriptomics further maps ncRNA expression to vulnerable neuronal and glial subtypes across cortical and subcortical regions. Clinically, circulating ncRNAs, especially those packaged in extracellular vesicles, exhibit stable, disease-associated signatures, supporting their potential as minimally invasive biomarkers for early diagnosis and patient stratification. Parallel advances in RNA interference, antisense oligonucleotides, CRISPR-based editing, and vesicle-mediated delivery highlight emerging therapeutic opportunities. These developments position ncRNAs as both mechanistic determinants and translational targets in NDDs, offering a unifying framework that links genome regulation, environmental cues, and neural plasticity, and paving the way for next-generation RNA-guided diagnostics and therapeutics.

## Linked entities

- **Diseases:** autism spectrum disorder (MONDO:0005258), attention-deficit/hyperactivity disorder (MONDO:0007743), intellectual disability (MONDO:0001071)

## Full-text entities

- **Diseases:** ID (MESH:D008607), NDDs (MESH:D002658), ASD (MESH:D000067877), ADHD (MESH:D001289)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC12838721/full.md

## References

86 references — full list in the complete paper: https://tomesphere.com/paper/PMC12838721/full.md

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Source: https://tomesphere.com/paper/PMC12838721