# Pentraxin 3 as a Modulator of miRNAs and Extracellular Vesicles Release in Triple-Negative Breast Cancer Cells

**Authors:** Diogo Gomes da Costa, Fábio Ribeiro Queiroz, Flávia Santiago de Oliveira, Angelo Borges de Melo Neto, Marina Malheiros Araújo Silvestrini, Ludmila Rodrigues Pinto Ferreira, Isabela Aurora Rodrigues, Virgínia Mendes Russo Vallejos, Adriana Oliveira Costa, Frédéric Frézard, Jorge Gomes Goulart Ferreira, Matheus de Souza Gomes, Andréa Teixeira-Carvalho, Paulo Guilherme de Oliveira Salles, Letícia da Conceição Braga, Adriana Abalen Martins Dias

PMC · DOI: 10.3390/biomedicines14010014 · Biomedicines · 2025-12-20

## TL;DR

This study shows that Pentraxin 3 (PTX3) can change miRNA levels and reduce harmful extracellular vesicles in aggressive breast cancer cells, suggesting it could be a new treatment target.

## Contribution

The study reveals PTX3's novel role in modulating miRNA expression and EV release in triple-negative breast cancer cells.

## Key findings

- rhPTX3 treatment altered the expression of 142 miRNAs in TNBC cells.
- rhPTX3 reduced the CD44+ extracellular vesicle subpopulation while increasing total EV release.
- Key cancer-related molecules like IL6, CXCL8, and BCL2 were inhibited by rhPTX3 treatment.

## Abstract

Background/Objectives: Breast cancer is the most prevalent tumor among women worldwide, with the triple-negative (TNBC) being the most aggressive and therapeutically resistant subtype. It is crucial to investigate new therapeutic targets for the treatment of TNBC. Pentraxin 3 (PTX3), an acute-phase protein, has a complex role in tumor progression, with its expression associated with disease severity. We investigated the role of recombinant human PTX3 (rhPTX3) in modulating microRNA (miRNA) expression and extracellular vesicle (EV) release in TNBC MDA-MB-231 cells. Methods: PTX3 gene expression was evaluated by RT-qPCR. The miRNA expression profile was determined by small RNA Next-Generation Sequencing (NGS). EV release was analyzed by nanoparticle tracking analysis (NTA), flow cytometry, and protein quantification. Results: rhPTX3 treatment significantly increased PTX3 gene expression in MDA-MB-231 cells. Furthermore, rhPTX3 altered the expression profile of 142 miRNAs, with 112 being upregulated and 30 downregulated. These differentially expressed miRNAs were predicted to have 12,894 potential targets, impacting 29 canonical pathways related to carcinogenesis. Key molecules for cancer progression were inhibited (IL6, IL4, CXCL8, CXCR4, CXCL12; ICAM1, CD44 and BCL2), and pro-apoptotic BAD was activated. While rhPTX3-treatment increased total EV release, it specifically reduced the percentage of the CD44+ EV subpopulation. Conclusions: Our data demonstrates that PTX3 modulates the miRNA expression profile and EV release dynamics, particularly by reducing the CD44+ EV population, which points to a tumor-suppressor role in this TNBC context. Given the limited therapeutic avenues for TNBC, our results suggest that PTX3 and its downstream molecular effects represent promising and previously unexplored potential therapeutic targets.

## Linked entities

- **Genes:** PTX3 (pentraxin 3) [NCBI Gene 5806], IL6 (interleukin 6) [NCBI Gene 3569], IL4 (interleukin 4) [NCBI Gene 3565], CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576], CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852], CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387], ICAM1 (intercellular adhesion molecule 1) [NCBI Gene 3383], CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960], BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596], BAD (BCL2 associated agonist of cell death) [NCBI Gene 572]
- **Diseases:** breast cancer (MONDO:0004989), triple-negative breast cancer (MONDO:0005494)

## Full-text entities

- **Genes:** IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}, PTX3 (pentraxin 3) [NCBI Gene 5806] {aka TNFAIP5, TSG-14}, ICAM1 (intercellular adhesion molecule 1) [NCBI Gene 3383] {aka BB2, CD54, P3.58}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 7852] {aka CD184, D2S201E, FB22, HM89, HSY3RR, LCR1}
- **Diseases:** cancer (MESH:D009369), carcinogenesis (MESH:D063646), Triple-Negative (MESH:D064726), Breast Cancer (MESH:D001943)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12838261/full.md

## References

42 references — full list in the complete paper: https://tomesphere.com/paper/PMC12838261/full.md

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Source: https://tomesphere.com/paper/PMC12838261