# Macrolide resistance in Staphylococcus from COVID-19 patients in Santander

**Authors:** Michael J. Santos-Angarita, Monica Y. Arias Guerrero, Andrea J. Parada-Diaz, Natalia A. Bravo Granados, Nadia C. Alfonso Vargas, Juanita Trejos-Suárez

PMC · DOI: 10.15649/cuidarte.4924 · 2025-12-17

## TL;DR

The study found high macrolide resistance in Staphylococcus bacteria from COVID-19 patients in Santander, likely due to widespread antibiotic use during the pandemic.

## Contribution

This study reports the prevalence of macrolide resistance genes in Gram-positive bacteria from hospitalized COVID-19 patients in Santander, Colombia.

## Key findings

- Staphylococcus aureus was the most common species isolated, with 58.33% of strains.
- ermB and ermT were the most prevalent resistance genes detected in 58.33% and 45.83% of strains, respectively.
- 81.25% of strains showed genotypic resistance to macrolides, with 47.92% showing phenotypic resistance.

## Abstract

Intensive use of macrolides, such as azithromycin, during the COVID-19 pandemic has facilitated the development of antimicrobial resistance in Gram-positive bacteria through multiple resistance mechanisms, including ribosomal RNA modification, efflux pumps, and enzymatic inactivation.

To describe the prevalence of resistance genes in bacteria isolated from COVID-19 patients in Santander, Colombia.

A descriptive study was conducted on 112 stored samples from nasopharyngeal and oropharyngeal swabs and tracheal aspirates collected from hospitalized COVID-19 patients in 2020, from which 48 Gram-positive strains were isolated. Macrolide resistance and the presence of the ermA, ermB, ermT, and mef(A/E) genes were evaluated through phenotypic and molecular tests.

Staphylococcus aureus was the most prevalent species at 58.33% (28), followed by Staphylococcus epidermidis at 31.25% (15). A total of 47.92% (23) of the strains showed phenotypic resistance to azithromycin, and 81.25% (39) displayed genotypic resistance, with ermB being the most prevalent at 58.33% (28) and ermT at 45.83% (22), with no detection of mef(A/E).

These findings reveal a high prevalence of macrolide resistance, which may be related to the extensive use of these antibiotics during the pandemic.

The increase in macrolide resistance among Gram-positive bacteria represents a critical public health challenge, especially in the context of pandemics. These results underscore the urgent need to implement control measures in antibiotic use.

## Linked entities

- **Genes:** TMEM94 (transmembrane protein 94) [NCBI Gene 9772], erm(B) (23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)) [NCBI Gene 8154416]
- **Chemicals:** azithromycin (PubChem CID 447043)
- **Diseases:** COVID-19 (MONDO:0100096)
- **Species:** Staphylococcus aureus (taxon 1280), Staphylococcus epidermidis (taxon 1282)

## Full-text entities

- **Genes:** ermA [NCBI Gene 13913675], ELF4 (E74 like ETS transcription factor 4) [NCBI Gene 2000] {aka AIFBL2, ELFR, MEF}
- **Diseases:** bacterial infections (MESH:D001424), bacterial co-infection (MESH:D060085), urinary tract infections (MESH:D014552), COVID-19 (MESH:D000086382), infection (MESH:D007239), respiratory infections (MESH:D012141)
- **Chemicals:** Agarose (MESH:D012685), CO2 (MESH:D002245), 1X TAE (-), Macrolide (MESH:D018942), water (MESH:D014867), erythromycin (MESH:D004917), acid (MESH:D000143), Azithromycin (MESH:D017963), clarithromycin (MESH:D017291), agar (MESH:D000362), EDTA (MESH:D004492)
- **Species:** Homo sapiens (human, species) [taxon 9606], Staphylococcus epidermidis (species) [taxon 1282], Staphylococcus chromogenes (species) [taxon 46126], Staphylococcus aureus (species) [taxon 1280], S. hemolyticus [taxon 1036319], Streptococcus pyogenes (species) [taxon 1314], Staphylococcus saprophyticus (species) [taxon 29385]
- **Cell lines:** ATCC 35984 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023)

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12834522/full.md

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Source: https://tomesphere.com/paper/PMC12834522