# miR-101/METTL3 axis induces autophagy by interrupting FOXG1/EIF3J-AS1 binding in gliomas

**Authors:** Yaping Yan, Shanshan Liu, Ailing Luo, Mansi Cai, Xiaohong Zhang, Xiaodan Liu, Yingyi Xu, Yabei Su, Siyi Zhang, Jianhua Liu, Xiaoping Liu

PMC · DOI: 10.1038/s41419-025-08285-6 · Cell Death & Disease · 2025-12-13

## TL;DR

The study reveals how miR-101 and METTL3 regulate autophagy in gliomas through interactions with the lncRNA EIF3J-AS1 and transcription factor FOXG1.

## Contribution

Identifies a novel miR-101/METTL3 axis that modulates autophagy by disrupting EIF3J-AS1/FOXG1 binding in gliomas.

## Key findings

- EIF3J-AS1 is upregulated in glioblastoma and promotes tumor growth while inhibiting autophagy.
- METTL3 enhances EIF3J-AS1 m6A modification and its binding to FOXG1, suppressing autophagy via MIF downregulation.
- miR-101 suppresses METTL3, disrupting EIF3J-AS1-FOXG1 binding and restoring autophagy through MIF upregulation.

## Abstract

The role of autophagy in glioma remains controversial, with long non-coding RNAs (lncRNAs) playing a crucial role in its regulation. N6-methyladenosine (m6A) modification influences lncRNA expression and function. Specifically, lncRNA EIF3J-AS1 acts as an oncogene in glioma, yet the mechanisms driving its upregulation remain unclear. This study demonstrates that EIF3J-AS1 expression is significantly elevated in glioblastoma multiforme (GBM) compared to low-grade glioma (LGG) and normal brain tissue. RNA sequencing (RNA-seq) identified EIF3J-AS1 as a target of the tumor suppressor miR-101, with functional assays showing its role in promoting glioma cell proliferation, inhibiting autophagy, and enhancing tumorigenesis in vivo. Methylated RNA immunoprecipitation (MeRIP) and bioinformatics analyses confirmed m6A modification of EIF3J-AS1, which correlates positively with the m6A methyltransferase METTL3 in glioma tissues. Mechanistically, METTL3 promotes m6A-dependent binding of EIF3J-AS1 to the transcription factor FOXG1. RNA-seq screening further identified macrophage migration inhibitory factor (MIF), an autophagy-promoting gene, as a downstream target of both METTL3 and EIF3J-AS1. Functional validation revealed that the METTL3/EIF3J-AS1/FOXG1 axis suppresses autophagy via MIF downregulation. Conversely, miR-101-mediated suppression of METTL3 disrupts EIF3J-AS1-FOXG1 binding, restoring MIF expression and promoting autophagy. These findings highlight EIF3J-AS1 and METTL3 as potential therapeutic targets, with disruption of EIF3J-AS1-FOXG1 interactions representing a novel autophagy-modulating strategy for glioma treatment.

## Linked entities

- **Genes:** mir101 (microRNA mir-101) [NCBI Gene 100187678], METTL3 (methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit) [NCBI Gene 56339], EIF3J-DT (EIF3J divergent transcript) [NCBI Gene 645212], FOXG1 (forkhead box G1) [NCBI Gene 2290], MIF (macrophage migration inhibitory factor) [NCBI Gene 4282]
- **Diseases:** glioma (MONDO:0021042), glioblastoma multiforme (MONDO:0018177), low-grade glioma (MONDO:0021637)

## Full-text entities

- **Genes:** METTL3 (methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit) [NCBI Gene 56339] {aka IME4, M6A, MT-A70, Spo8, hMETTL3}, MIF (macrophage migration inhibitory factor) [NCBI Gene 4282] {aka GIF, GLIF, MMIF}, FOXG1 (forkhead box G1) [NCBI Gene 2290] {aka BF1, BF2, FHKL3, FKH2, FKHL1, FKHL2}, EIF3J-DT (EIF3J divergent transcript) [NCBI Gene 645212] {aka EIF3J-AS1}
- **Diseases:** tumor (MESH:D009369), LGG (MESH:D008228), tumorigenesis (MESH:D063646), GBM (MESH:D005909), glioma (MESH:D005910)
- **Chemicals:** m6A (MESH:C005955), N6-methyladenosine (MESH:C010223)

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12830681/full.md

## References

3 references — full list in the complete paper: https://tomesphere.com/paper/PMC12830681/full.md

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Source: https://tomesphere.com/paper/PMC12830681