# In silico evaluation of bioactive compounds from the sea urchin Temnopleurus toreumaticus: Potential multifunctional agents against mosquito vectors and tropical pathogens

**Authors:** Karnan Ramachandran, Senthil Bakthavatchalam, Velavan Sivanandham, Shunmuga Vadivu Ramalingam, Pitchaimuthu Mariappan, Renganathan Senthil, Chandramohan Govindasamy, Khalid S. Al-Numair, Ramachandran Vinayagam, Zhi-Hong Wen, Hsien-Kuo Chin

PMC · DOI: 10.1371/journal.pone.0341080 · PLOS One · 2026-01-23

## TL;DR

This study explores compounds from a sea urchin that may act as eco-friendly agents against mosquitoes and tropical diseases like malaria and chikungunya.

## Contribution

The study identifies bioactive compounds from a sea urchin with potential multitarget larvicidal, antimalarial, and antiviral properties.

## Key findings

- The sea urchin extract showed strong larvicidal and pupicidal effects against Aedes aegypti.
- In silico docking revealed binding affinities for multiple targets including acetylcholinesterase and chikungunya protease.
- The extract exhibited cytotoxic activity in yeast cell-based assays.

## Abstract

This study investigates the ethanolic extract of the sea urchin Temnopleurus toreumaticus (test and spine) for its larvicidal efficacy against Aedes aegypti, cytotoxicity, and in silico interactions supporting potential antimalarial and antiviral activities. Zoochemical profiling by Fourier-transform infrared spectroscopy (FT-IR) showed the presence of functional groups, while gas chromatography-mass spectrometry (GC-MS) analysis identified 24 bioactive compounds with insecticidal and enzyme-inhibitory properties. The extract exhibited strong larvicidal (LC₅₀ = 164.18 µg/mL) and pupicidal (LC₅₀ = 209.91 µg/mL) effects on A. aegypti in a concentration‑dependent manner, supported by significant acetylcholinesterase inhibition (IC₅₀ = 151.49 µg/mL). Morphological examinations showed epithelial disorganization and structural damage in treated larvae and pupae. In silico docking confirmed that the identified zoochemicals exhibited binding affinities ranging from –7 to –8 kcal/mol for juvenile hormone binding protein (PDB 5V13), –5 to –6 kcal/mol for acetylcholinesterase (PDB 1DX4), –4 to –5 kcal/mol for Plasmodium falciparum lactate dehydrogenase (PDB 1CEQ), and –4 to –5 kcal/mol for chikungunya nsP2 protease (PDB 3TRK), indicating their multitarget larvicidal, antimalarial, and antiviral potential. Yeast cell-based assays indicated cytotoxic activity (EC₅₀ = 159.27 µg/mL) with a strong dose-response relationship. Overall, the ethanolic extract of T. toreumaticus is a promising lead for next‑generation, environmentally safe biocontrol agents targeting vector‑borne diseases such as malaria and chikungunya, while clearly emphasizing that the antiviral and antimalarial properties are currently supported only by in silico evidence and require further in vitro and in vivo validation.

## Linked entities

- **Diseases:** malaria (MONDO:0005136), chikungunya (MONDO:0017941)
- **Species:** Aedes aegypti (taxon 7159), Plasmodium falciparum (taxon 5833), Temnopleurus toreumaticus (taxon 161058)

## Full-text entities

- **Diseases:** Cytotoxicity (MESH:D064420), microbial (MESH:D015163), neurotoxicity (MESH:D020258), developmental (MESH:C567924), endocrine (MESH:D004700), deformities (MESH:D009140), paralysis (MESH:D010243), dengue (MESH:D003715), inflammation (MESH:D007249), disease (MESH:D004194), malaria (MESH:D008288), arthritic disease (MESH:D015535), Vector-borne diseases (MESH:D000079426)
- **Chemicals:** lactate (MESH:D019344), artemisinin (MESH:C031327), acetylthiocholine iodide (MESH:C543539), atovaquone (MESH:D053626), T. toreumaticus ethanolic extract (-), polyphenol (MESH:D059808), acetylcholine (MESH:D000109), pyruvate (MESH:D019289), glucose (MESH:D005947), 5,5'-dithiobis-(2-nitrobenzoic acid) (MESH:D004228), toluidine blue (MESH:D014048), resazurin (MESH:C005843), zinc oxide (MESH:D015034), fatty acid (MESH:D005227), 1-tetradecanol (MESH:C020940), n-Hexadecanoic acid (MESH:D019308), hydrogen (MESH:D006859), polysaccharides (MESH:D011134), proguanil (MESH:D002727), alkaloid (MESH:D000470), methylene blue (MESH:D008751), alcohols (MESH:D000438), trypan blue (MESH:D014343), H2O (MESH:D014867), Malathion (MESH:D008294), NaCl (MESH:D012965), NAD+ (MESH:D009243), iodine (MESH:D007455), organophosphates (MESH:D010755), 9-octadecenoic acid (MESH:D019301), 2,4-dinitrophenylhydrazine (MESH:C004787), tetradecanoic acid (MESH:D019814), Terpenoids (MESH:D013729), octadecanoic acid (MESH:C031183), ATP (MESH:D000255), Helium (MESH:D006371), phenols (MESH:D010636), EGTA (MESH:D004533), phosphate (MESH:D010710), C (MESH:D002244), Triton X-100 (MESH:D017830), amines (MESH:D000588), potassium iodide (MESH:D011193), ethanol (MESH:D000431)
- **Species:** Culex pipiens (common house mosquito, species) [taxon 7175], Vachellia nilotica (babul, species) [taxon 138033], Echinoidea (sea urchin, class) [taxon 7625], Spongia officinalis (commercial sponge, species) [taxon 252964], Bohadschia cousteaui (species) [taxon 864311], Echinodermata (echinoderms, phylum) [taxon 7586], Paracentrotus lividus (common sea urchin, species) [taxon 7656], Echinometra mathaei (species) [taxon 31178], Miomantis paykullii (species) [taxon 627754], Ocimum americanum (American basil, species) [taxon 204141], Chikungunya virus (no rank) [taxon 37124], Saccostrea glomerata (Sydney rock oyster, species) [taxon 157728], Aedes aegypti (yellow fever mosquito, species) [taxon 7159], Diadema setosum (species) [taxon 31175], Mantis religiosa (European mantid, species) [taxon 7507], Spinifex littoreus (species) [taxon 435770], Diadema savignyi (species) [taxon 105360], Homo sapiens (human, species) [taxon 9606], Charybdis natator (species) [taxon 243326], Temnopleurus toreumaticus (species) [taxon 161058], Plasmodium falciparum (malaria parasite P. falciparum, species) [taxon 5833], Anopheles pharoensis (species) [taxon 221566], Aedes (subgenus) [taxon 149531], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Heliocidaris crassispina (species) [taxon 1043166], Artemisia absinthium (species) [taxon 72332], Potamonautes niloticus (species) [taxon 304473], Drosophila melanogaster (fruit fly, species) [taxon 7227], Tribolium castaneum (red flour beetle, species) [taxon 7070]
- **Cell lines:** WILEY7.LIB — Homo sapiens (Human), Diffuse large B-cell lymphoma germinal center B-cell type, Cancer cell line (CVCL_H209)

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12829849/full.md

## References

70 references — full list in the complete paper: https://tomesphere.com/paper/PMC12829849/full.md

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Source: https://tomesphere.com/paper/PMC12829849