# The conserved outer mitochondrial membrane protein Mtch regulates mitophagy during Drosophila intestinal development

**Authors:** Lucas J. Restrepo, Jasmine K. Graslie, Tina M. Fortier, Eric H. Baehrecke

PMC · DOI: 10.1371/journal.pbio.3003616 · PLOS Biology · 2026-01-23

## TL;DR

This study identifies Mtch as a new regulator of mitophagy in fruit fly intestinal cells, showing its role in regulating the insertion of a key mitophagy receptor.

## Contribution

The study reveals Mtch as a novel regulator of mitophagy by linking it to the insertion of the BNIP3 receptor during intestinal development in Drosophila.

## Key findings

- Mtch mutant cells fail to clear mitochondria and show elevated autophagy markers.
- Mtch functions in a mitophagy pathway with Vps13D, PINK1, Parkin, and BNIP3.
- Mtch is required for proper expression of the tail-anchored mitophagy receptor BNIP3.

## Abstract

The clearance of mitochondria by autophagy (mitophagy) is important for cell health. Mutations in genes that are required for mitophagy, including Vps13D, PINK1, and Parkin, are associated with movement disorders, but gaps exist in our understanding of how Vps13D regulates mitophagy. Here, we identify Mtch (MTCH2 in humans) as a regulator of mitophagy based on a relationship with Vps13D during developmentally programmed mitophagy in Drosophila intestine enterocyte cells. Similar to Vps13D mutant cells, Mtch mutant cells fail to clear mitochondria and possess elevated markers of autophagy. Genetic and molecular experiments reveal that Mtch and Vps13D function in a mitophagy pathway with PINK1, Parkin, and the mitophagy receptor BNIP3. Unlike Vps13D and Parkin mutant cells, Mtch is required for proper expression of the tail-anchored protein BNIP3. Thus, the tail-anchored protein insertase function of Mtch/MTCH2 likely explains how these proteins possess multiple cell context-specific functions.

Mitophagy is critical for cellular health and is associated with multiple diseases. This study shows that the outer mitochondrial membrane protein Mtch functions as a novel regulator of mitophagy during Drosophila intestinal development, likely by regulating the insertion of the mitophagy receptor BNIP3.

## Linked entities

- **Genes:** Mtch (Mitochondrial carrier homolog 1) [NCBI Gene 38026], VPS13D (vacuolar protein sorting 13 homolog D) [NCBI Gene 55187], PINK1 (PTEN induced kinase 1) [NCBI Gene 65018], park (parkin) [NCBI Gene 40336], BNIP3 (BCL2 interacting protein 3) [NCBI Gene 664], MTCH2 (mitochondrial carrier 2) [NCBI Gene 23788]
- **Proteins:** Mtch (Mitochondrial carrier homolog 1), VPS13D (vacuolar protein sorting 13 homolog D), PINK1 (PTEN induced kinase 1), park (parkin), BNIP3 (BCL2 interacting protein 3)
- **Species:** Drosophila (taxon 7215)

## Full-text entities

- **Genes:** Mtch (Mitochondrial carrier homolog 1) [NCBI Gene 38026] {aka CG6851, Dmel\CG6851}, Pink1 (PTEN-induced putative kinase 1) [NCBI Gene 31607] {aka BEST:GH23468, CG4523, Dmel\CG4523, PINK-1, Pink, dPINK1}, Decay (Death executioner caspase related to Apopain/Yama) [NCBI Gene 42008] {aka CAS3, CC-3, CC3, CG14902, Cas3, Casp-3}, Atg8a (Autophagy-related 8a) [NCBI Gene 32001] {aka ATG8, ATG8/LC3, Atg-8a, Atg8, Atg8/LC3, Atg8alpha}, BNIP3 (BNIP3) [NCBI Gene 40278] {aka BBH1, CG5059, Dmel\CG5059}, ATP5MC1 (ATP synthase membrane subunit c locus 1) [NCBI Gene 516] {aka ATP5A, ATP5G, ATP5G1}, Fis1 (Fission, mitochondrial 1) [NCBI Gene 49892] {aka BcDNA:RE29957, CG17510, Dmel\CG17510, NEST:bs15a08, bs15a08.y1, dFis1}, p (pink) [NCBI Gene 41025] {aka CG9770, Dmel\CG9770, HPS5, NP_649810, dHPS5, snb}, VPS13D (vacuolar protein sorting 13 homolog D) [NCBI Gene 55187] {aka BLTP5D, SCA24, SCAR4, SCASI}, COX8 (Cytochrome c oxidase subunit 8) [NCBI Gene 40390] {aka 0554/18, BcDNA:GH15688, CG7181, CcO VIIc, CoVIII, Dmel\CG7181}, vas (vasa) [NCBI Gene 26067080] {aka BG:DS00929.14, CG3506, CG43081, CG46283, DDX4, DmRH25}, RpS27A (Ribosomal protein S27A) [NCBI Gene 34420] {aka CG5271, DUb80, Dmel\CG5271, Dub80, RpS27, S31e}, BNIP3 (BCL2 interacting protein 3) [NCBI Gene 664] {aka HABON, NIP3}, zuc (zucchini) [NCBI Gene 34609] {aka CG12314, Dmel\CG12314, MitoPLD}, RpL32 (Ribosomal protein L32) [NCBI Gene 43573] {aka 143250_at, BcDNA:RH03940, CG7939, Dmel\CG7939, L32, L32e}, hid (head involution defective) [NCBI Gene 40009] {aka CG5123, Dmel\CG5123, Hid1, W, hid1, his}, blw (bellwether) [NCBI Gene 37617] {aka A2(2nd)27, ATP syn-alpha, ATP5A, ATP5F1A, ATP5a, ATP5alpha}, Ref2 (RNA and export factor binding protein 2) [NCBI Gene 34667] {aka CG17031, Dmel\CG17031, cg17031}, COX4 (Cytochrome c oxidase subunit 4) [NCBI Gene 35279] {aka C-IV s.4, CG10664, COX, COX IV, COXIV, CX41}
- **Diseases:** Parkinson's (MESH:D010300), inflammatory (MESH:D007249), Alzheimer's (MESH:D000544), movement disorder (MESH:D009069)
- **Chemicals:** uranyl acetate (MESH:C005460), ATP (MESH:D000255), propylene oxide (MESH:C009068), water (MESH:D014867), ROS (MESH:D017382), Araldite (MESH:C005752), oil (MESH:D009821), glutaraldehyde (MESH:D005976), ethanol (MESH:D000431), paraformaldehyde (MESH:C003043), lipid (MESH:D008055), agar (MESH:D000362), CoinFLP (-), PBS (MESH:D007854)
- **Species:** Drosophila melanogaster (fruit fly, species) [taxon 7227], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** w1118 — Homo sapiens (Human), Supernumerary circular chromosome, Finite cell line (CVCL_4D80), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12829841/full.md

## References

33 references — full list in the complete paper: https://tomesphere.com/paper/PMC12829841/full.md

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Source: https://tomesphere.com/paper/PMC12829841