# Phenology overshadows seed treatment and cultivar effects on fall armyworm gut microbiome following short-term feeding on rice

**Authors:** Devi Balakrishnan, Stephanie Cromwell, Paul A. Ayayee, Nick Bateman, Rupesh Kariyat

PMC · DOI: 10.7717/peerj.20458 · PeerJ · 2026-01-20

## TL;DR

This study explores how rice plant growth stages affect the gut microbiome of fall armyworm larvae, finding that plant phenology has a bigger impact than seed treatments or rice cultivars.

## Contribution

The study reveals that rice phenology significantly influences fall armyworm gut microbiota, overshadowing effects of seed treatments and cultivars.

## Key findings

- Crop phenology significantly impacted larval gut microbiota composition.
- Bacterial taxa linked to larval detoxification and development were identified.
- Chemical treatments and rice cultivars had no statistically significant effects on microbiota.

## Abstract

Plants mediate host susceptibility or resistance to infesting insects through various documented ways, and possibly via disrupting insect gut microbiota, an area that is underexplored in rice. The fall armyworm (FAW) (Spodoptera frugiperda (J.E. Smith) is a highly invasive herbivore that infests ∼350 host plant species, including rice (Oryza sativa L.). Exploring the impacts of chemical seed treatments on rice against FAW on the composition and attendant detoxification functionalities of the gut microbiota, as well as the subsequent effect on larval development, could inform the development of more effective management strategies. To test this, we characterized the gut microbiota of FAW 4 th instar larvae exposed to rice cultivars with and without chemical seed treatment (CruiserMaxx plus Vibrance package) at vegetative and reproductive stages for 96-hours. Results did not determine any statistically significant effects of chemical treatments and rice cultivars on larval microbiota composition. However, crop phenology (vegetative and reproductive stages) significantly impacted larval microbiota. Bacterial taxa previously implicated in FAW larval detoxification of plant secondary compounds, as well as FAW growth, and development, were uncovered across larvae. Hence, our findings highlight the importance of considering rice phenology and associated traits in developing management strategies against this highly polyphagous pest.

## Linked entities

- **Species:** Spodoptera frugiperda (taxon 7108), Oryza sativa (taxon 4530)

## Full-text entities

- **Diseases:** FAW (MESH:C537863)
- **Species:** Oryza sativa (Asian cultivated rice, species) [taxon 4530], Spodoptera frugiperda (fall armyworm, species) [taxon 7108]

## Full text

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## Figures

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## References

64 references — full list in the complete paper: https://tomesphere.com/paper/PMC12829461/full.md

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Source: https://tomesphere.com/paper/PMC12829461