# Burden and trends of antimicrobial non-susceptibility in skin and soft tissue infections: nine-year microbiological surveillance from a tertiary hospital in Riyadh, Saudi Arabia

**Authors:** Yahya Shabi, Abdullah A. Alshehri, Khalifa Binkhamis, Mohammed Alqahtani, Thamir Saad Alsaeed, Ali Abdullah Aljaberi, Saleh Abdullah Alkhamis, Mohammad K. Alshomrani, Abdullah Z. Almutairi, Abdulah J. Alqahtani, Ahmad Jebril M. Bosaily, Fatimah Alshahrani

PMC · DOI: 10.3389/fmicb.2025.1712297 · 2026-01-09

## TL;DR

This study analyzed 9 years of microbiological data from a Saudi hospital to track antimicrobial resistance trends in skin and soft tissue infections.

## Contribution

The study provides a detailed, species-level analysis of antimicrobial non-susceptibility trends in SSTIs in Saudi Arabia.

## Key findings

- Gram-negative organisms were most common, with rising resistance to amikacin and carbapenems.
- Staphylococcus aureus showed a decline in oxacillin resistance over time.
- Tissue-derived isolates had higher meropenem non-susceptibility compared to swab isolates.

## Abstract

Skin and soft tissue infections (SSTIs) impose a substantial global and regional burden, and their management is increasingly complicated by antimicrobial non-susceptibility. In Saudi Arabia, data remain fragmented, with few studies providing species-level analyses stratified by specimen type and infection depth.

We retrospectively analyzed 6,760 wound and tissue specimens (2016–2024) from a tertiary hospital in Riyadh, Saudi Arabia. Organisms were identified using standard microbiological methods and VITEK 2. Antimicrobial susceptibility testing was interpreted according to CLSI M100, defining non-susceptibility as resistant or intermediate categories. Binary logistic regression was used to assess temporal trends in antimicrobial non-susceptibility, with year of isolation entered as a continuous predictor.

Gram-negative organisms predominated (63.2%), followed by Gram-positives (35.6%) and yeast (1.2%). Staphylococcus aureus was the leading pathogen (28.8%), with methicillin resistance detected in 39.0% of isolates. Escherichia coli (14.7%) and Pseudomonas aeruginosa (12.1%) were also common. Among Enterobacterales, 26.9% were extended-spectrum β-lactamase (ESBL) producers and 16.1% were carbapenem-resistant Enterobacterales (CRE). P. aeruginosa showed high carbapenem non-susceptibility. Tissue-derived isolates demonstrated significantly higher meropenem non-susceptibility than swab Isolates (20.3% vs. 16.4%, p = 0.027), although Enterobacterales subsets occasionally showed the reverse pattern. Temporal analysis revealed rising non-susceptibility to amikacin, ceftriaxone, imipenem, and meropenem (p < 0.05), while oxacillin resistance in S. aureus and clindamycin non-susceptibility in Gram-positives declined over time.

Gram-negative organisms predominated in SSTIs, showing rising non-susceptibility to amikacin and carbapenems. Separately, among Gram-positive pathogens, S. aureus exhibited a clear decline in oxacillin resistance. These shifts underscore the need for ongoing resistance surveillance.

## Linked entities

- **Species:** Staphylococcus aureus (taxon 1280), Escherichia coli (taxon 562), Pseudomonas aeruginosa (taxon 287), Enterobacterales (taxon 91347)

## Full-text entities

- **Diseases:** infection (MESH:D007239), SSTIs (MESH:D018461)
- **Chemicals:** ceftriaxone (MESH:D002443), imipenem (MESH:D015378), amikacin (MESH:D000583), carbapenem (MESH:D015780), clindamycin (MESH:D002981), methicillin (MESH:D008712), oxacillin (MESH:D010068), meropenem (MESH:D000077731)
- **Species:** Enterobacterales (order) [taxon 91347], Staphylococcus aureus (species) [taxon 1280], Escherichia coli (E. coli, species) [taxon 562], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Pseudomonas aeruginosa (species) [taxon 287]

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12827636/full.md

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Source: https://tomesphere.com/paper/PMC12827636