# Functional role of THRAP3 in modulating thyroid hormone–mediated gene networks in C2C12 myotubes

**Authors:** Taku Fukushima, Sachi Kuse, Yuka Hasegawa, Taiju Fujioka, Takeshi Nikawa, Satoru Masubuchi, Iori Sakakibara

PMC · DOI: 10.1371/journal.pone.0341353 · PLOS One · 2026-01-22

## TL;DR

This study shows that THRAP3 helps thyroid hormone regulate muscle development and function by controlling gene activity in muscle cells.

## Contribution

The study reveals THRAP3 as a new regulator of thyroid hormone signaling in skeletal muscle.

## Key findings

- THRAP3 loss reduces key myogenic gene expression and impairs muscle differentiation.
- THRAP3 supports triiodothyronine (T3)-induced gene expression in muscle cells.
- THRAP3 coordinates thyroid hormone–responsive gene networks in skeletal muscle.

## Abstract

Thyroid hormone (TH) secreted by the thyroid gland plays essential roles in regulating metabolism, development, and nervous system function. Thyroid hormone receptor-associated protein 3 (THRAP3) is a nuclear coactivator that interacts with the thyroid hormone receptor (TR) and facilitates target gene regulation through the mediator complex. Although this mechanism has been well studied in other tissues, the specific role of THRAP3 in skeletal muscle remains unclear. Here we investigated the function of THRAP3 in skeletal muscle using Thrap3 knockout (KO) C2C12 cells. Loss of THRAP3 significantly suppressed the expression of key myogenic regulatory factors, including Myod1, Mef2c, and myosin heavy chain genes, resulting in impaired myogenic differentiation and muscle diameter. Furthermore, we found that THRAP3 influences triiodothyronine (T3)-induced gene expression, suggesting that it cooperatively modulates thyroid hormone signaling in muscle cells. Taken together, our findings identify THRAP3 as a novel regulator of myogenesis and indicate that it supports T3 activity by coordinating thyroid hormone–responsive gene expression in skeletal muscle.

## Linked entities

- **Genes:** THRAP3 (thyroid hormone receptor associated protein 3) [NCBI Gene 9967], MYOD1 (myogenic differentiation 1) [NCBI Gene 4654], MEF2C (myocyte enhancer factor 2C) [NCBI Gene 4208]
- **Proteins:** THRAP3 (thyroid hormone receptor associated protein 3)
- **Chemicals:** triiodothyronine (T3) (PubChem CID 5920)

## Full-text entities

- **Genes:** Gnat1 (G protein subunit alpha transducin 1) [NCBI Gene 14685] {aka Gnat-1, Hg1f, Ird1, Ird2, Tralpha, irdc}, Akt2 (Akt serine/threonine kinase 2) [NCBI Gene 11652] {aka 2410016A19Rik, PKB, PKBbeta}, Myh2 (myosin, heavy polypeptide 2, skeletal muscle, adult) [NCBI Gene 17882] {aka MHC2A, MyHC-2a, MyHC-IIa, Myh2a, Myhs-f, Myhs-f1}, Ppargc1a (peroxisome proliferative activated receptor, gamma, coactivator 1 alpha) [NCBI Gene 19017] {aka A830037N07Rik, Gm11133, PGC-1, PPARGC-1-alpha, Pgc-1alpha, Pgc1}, Hrc (histidine rich calcium binding protein) [NCBI Gene 15464], Casq1 (calsequestrin 1) [NCBI Gene 12372] {aka CSQ, CSQ-1, CSQ1, sCSQ}, Pfkm (phosphofructokinase, muscle) [NCBI Gene 18642] {aka ATP-PFK, PFK-A, PFK-M, Pfk-4, Pfk4, Pfka}, Ndufs2 (NADH:ubiquinone oxidoreductase core subunit S2) [NCBI Gene 226646] {aka CI-49kD}, Myh8 (myosin, heavy polypeptide 8, skeletal muscle, perinatal) [NCBI Gene 17885] {aka 4832426G23Rik, MHCp, MyHC-pn, Myhs-p, Myhsp}, THRAP3 [NCBI Gene 101088597], Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, Myog (myogenin) [NCBI Gene 17928] {aka MYF4, bHLHc3, myo}, Cacna1s (calcium channel, voltage-dependent, L type, alpha 1S subunit) [NCBI Gene 12292] {aka Cav1.1, Cchl1a3, DHPR, DHPR alpha1s, fmd, mdg}, Myl4 (myosin, light polypeptide 4) [NCBI Gene 17896] {aka ALC1, AMLC, ELC, ELC1a, GT1, MLC1EMB}, Chrng (cholinergic receptor, nicotinic, gamma polypeptide) [NCBI Gene 11449] {aka Achr-3, Acrg}, Ulk1 [NCBI Gene 101098658], Myl2 (myosin, light polypeptide 2, regulatory, cardiac, slow) [NCBI Gene 17906] {aka Gm32672, MLC-2, MLC-2s/v, MLC-2v, Mlc2v, Mylpc}, Myl1 (myosin, light polypeptide 1) [NCBI Gene 17901] {aka MLC1f, MLC3f, Mylf}, Scn4a (sodium channel, voltage-gated, type IV, alpha) [NCBI Gene 110880] {aka Nav1.4, SkM1, mH2}, insulin [NCBI Gene 493804], Myf5 (myogenic factor 5) [NCBI Gene 17877] {aka B130010J22Rik, Myf-5, bHLHc2}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Th (tyrosine hydroxylase) [NCBI Gene 21823], Casq2 (calsequestrin 2) [NCBI Gene 12373] {aka Csq2, ESTM52, cCSQ}, Chrnd (cholinergic receptor, nicotinic, delta polypeptide) [NCBI Gene 11447] {aka Achr-4, Acrd}, Thrap3 (thyroid hormone receptor associated protein 3) [NCBI Gene 230753] {aka 9330151F09Rik, B230333E16Rik, Trap150}, Myh1 (myosin, heavy polypeptide 1, skeletal muscle, adult) [NCBI Gene 17879] {aka A530084A17Rik, IId, IId/x, MHC-2X/D, MHC2X/D, MYHC-IIX}, Mybph (myosin binding protein H) [NCBI Gene 53311] {aka MyBP-H}, Col6a1 (collagen, type VI, alpha 1) [NCBI Gene 12833] {aka Col6a-1}, Lpl [NCBI Gene 727696], Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56717] {aka 2610315D21Rik, FRAP, FRAP2, Frap1, RAFT1, RAPT1}, Ckm (creatine kinase, muscle) [NCBI Gene 12715] {aka CPK-M, Ckmm, M-CK, MCK}, Mylpf (myosin light chain, phosphorylatable, fast skeletal muscle) [NCBI Gene 17907] {aka 2410014J02Rik, MLC-2, Mlc2, Myl11}, Mef2c (myocyte enhancer factor 2C) [NCBI Gene 17260] {aka 5430401D19Rik, 9930028G15Rik, Mef2}, Bach1 (BTB and CNC homology 1, basic leucine zipper transcription factor 1) [NCBI Gene 12013] {aka 6230421P05Rik}, Myh7 (myosin, heavy polypeptide 7, cardiac muscle, beta) [NCBI Gene 140781] {aka B-MHC, MYH-beta/slow, MyHC-I, Myhc-b, Myhcb, beta-MHC}, Myhc (myosin heavy chain, cardiac muscle complex) [NCBI Gene 111671], Pygm (muscle glycogen phosphorylase) [NCBI Gene 19309] {aka PG}, Myl6b (myosin, light polypeptide 6B) [NCBI Gene 216459] {aka 5730437E04Rik, MLC1SA}, Vegfa (vascular endothelial growth factor A) [NCBI Gene 22339] {aka L-VEGF, Vegf, Vpf}, Ulk1 (unc-51 like kinase 1) [NCBI Gene 22241] {aka Unc51.1, mKIAA0722}, THRAP3 (thyroid hormone receptor associated protein 3) [NCBI Gene 9967] {aka BCLAF2, TRAP150}, Chrna1 (cholinergic receptor nicotinic alpha 1 subunit) [NCBI Gene 11435] {aka Achr-1, Acra}, Cox6c (cytochrome c oxidase subunit 6C) [NCBI Gene 12864], Ryr1 (ryanodine receptor 1, skeletal muscle) [NCBI Gene 20190] {aka RYR-1, Ryr, skrr}, Ctrl (chymotrypsin-like) [NCBI Gene 109660] {aka 0910001G08Rik, 1810004D15Rik, Ctra-1, Ctra1, chymopasin, mFLJ00366}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, Myf6 (myogenic factor 6) [NCBI Gene 17878] {aka MRF4, bHLHc4, herculin}, Myh4 (myosin, heavy polypeptide 4, skeletal muscle) [NCBI Gene 17884] {aka MHC2B, MM, MYH-2B, Minimsc, Minmus, MyHC-IIb}, Mybpc2 (myosin binding protein C, fast-type) [NCBI Gene 233199], Lpl (lipoprotein lipase) [NCBI Gene 16956], Myod1 (myogenic differentiation 1) [NCBI Gene 17927] {aka MYF3, MyoD, Myod-1, bHLHc1}, Atp2a1 (ATPase, Ca++ transporting, cardiac muscle, fast twitch 1) [NCBI Gene 11937] {aka SERCA1}, Cacnb1 (calcium channel, voltage-dependent, beta 1 subunit) [NCBI Gene 12295] {aka CAB1, Cchb1, Cchlb1}, Rptor (regulatory associated protein of MTOR, complex 1) [NCBI Gene 74370] {aka 4932417H02Rik, Rap, Raptor, mKIAA1303}
- **Diseases:** intolerance (MESH:D005633), Hashimoto's thyroiditis (MESH:D050031), Graves' disease (MESH:D006111), cardiac muscle contraction (MESH:C536214), cancer (MESH:D009369), cardiac (MESH:D006331), hypertrophic cardiomyopathy (MESH:D002312), blood cancers (MESH:D019337), tachycardia (MESH:D013610)
- **Chemicals:** calcium (MESH:D002118), PVDF (MESH:C024865), penicillin (MESH:D010406), ATP (MESH:D000255), CO2 (MESH:D002245), T3 (MESH:D014284), MTT (MESH:C070243), phosphate (MESH:D010710), paraformaldehyde (MESH:C003043), TPM (MESH:D000077236), DMEM (-), T4 (MESH:D013974), PBS (MESH:D007854), streptomycin (MESH:D013307), DAPI (MESH:C007293)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** C2C12 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0188)

## Full text

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## Figures

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## References

49 references — full list in the complete paper: https://tomesphere.com/paper/PMC12826480/full.md

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Source: https://tomesphere.com/paper/PMC12826480