# Paenibacillus encodes a membrane-localized Spo0B

**Authors:** Isabella N. Lin, Cassidy R. Prince, Heather A. Feaga

PMC · DOI: 10.1128/jb.00367-25 · Journal of Bacteriology · 2025-12-29

## TL;DR

This study identifies a membrane-localized variant of the Spo0B protein in Paenibacillus, which is important for sporulation and is widely conserved across the genus.

## Contribution

The discovery of a conserved membrane-localized Spo0B variant in Paenibacillus, which is crucial for sporulation phosphorelay interactions.

## Key findings

- Spo0B in Paenibacillus contains a transmembrane domain and is localized to the cell membrane.
- Spo0B-TM is present in 92% of surveyed Paenibacillus genomes and is important for phosphorelay interactions.
- Spo0B shows low sequence identity across Bacillota compared to other phosphorelay members.

## Abstract

Sporulation is a strategy employed by many bacteria to survive harsh environmental conditions. The genus Paenibacillus includes spore-forming species notorious for spoiling pasteurized dairy products and for causing American foulbrood in honeybee larvae, leading to colony collapse. Human pathogens within Paenibacillus are also a growing threat, causing fatal opportunistic infections. Here, we present a comprehensive survey of sporulation genes across 1,460 high-quality Paenibacillus genomes. We find that all members of the sporulation-initiating phosphorelay are well conserved, but that the Spo0B phosphotransferase contains a predicted transmembrane domain. We confirm that this domain localizes Spo0B to the cell membrane and therefore refer to this Spo0B variant as Spo0B-TM. Spo0B-TM is present in 92% of surveyed Paenibacillus genomes. Consistent with its high level of conservation, we find that the transmembrane domain is important for detecting its interaction with its phosphorelay partners Spo0A and Spo0F. Moreover, we find that Spo0B exhibits low sequence identity across Bacillota when compared with other members of the phosphorelay. Altogether, this work highlights the potential for diversity even within the highly conserved phosphorelay that initiates sporulation in Bacillota.

The spore is the most durable life form, and the sporulation process serves as a paradigm of cellular development and differentiation. Sporulation is well characterized in the model organism Bacillus subtilis, but we lack information about non-model spore formers. The genus Paenibacillus includes spore formers that negatively impact farming and food industries and public health. Here, we present the largest comprehensive search for sporulation genes in Paenibacillus and show that a unique membrane-localized variant of Spo0B is widespread throughout Paenibacillaceae and is present in other closely related families of Bacilli.

## Linked entities

- **Genes:** spo0B (sporulation initiation phosphotransferase) [NCBI Gene 935956], spo0A (response regulator, phosphorylated in response to complex YlbF/YmcA/YaaT) [NCBI Gene 938655], spo0F (two-component response regulator of sporulation initiation) [NCBI Gene 937041]
- **Proteins:** spo0B (sporulation initiation phosphotransferase), spo0A (response regulator, phosphorylated in response to complex YlbF/YmcA/YaaT), spo0F (two-component response regulator of sporulation initiation)
- **Species:** Paenibacillus (taxon 44249), Bacillus subtilis (taxon 1423)

## Full-text entities

- **Diseases:** opportunistic infections (MESH:D009894)
- **Species:** Bacillus subtilis (species) [taxon 1423], Homo sapiens (human, species) [taxon 9606], Paenibacillus (genus) [taxon 44249], Apis mellifera (bee, species) [taxon 7460]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12826061/full.md

## References

105 references — full list in the complete paper: https://tomesphere.com/paper/PMC12826061/full.md

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Source: https://tomesphere.com/paper/PMC12826061